Protein Alignment not and Usp30

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001284912.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Alignment Length: 530
• Identity: 98/530 - (18%)
• Similarity: 157/530 - (29%)
• Gaps: 214/530 - (40%)

  Fly   157 LRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSR--- 218
            :.||.|.|.|||:|.::||:...|....:.....:   :....|.|:..:.... |..:|:.
  Fly    38 IAGLHNFGLTCFLNTLLQAMAACPQFIAWLQLYNN---ASPDRKSLITSMLNTL-EVVNGTHATL 98

  Fly   219 -----SPLSLHRLLHLI-WNHAKHLAGYEQQDAHEFFIATLDVLHRH--------CVKAKAEHES 269
                 ||.::.|.|:.: |     :...|:.||||.|...|..|...        |:......::
  Fly    99 RGDPYSPGAVLRALNALGW-----VIPQEEHDAHELFHVLLTCLEEEAIRPQPLGCLSDALPTDN 158

  Fly   270 KSNSSGSGSGT------------------------------------------------------ 280
            ..|||.:|:.|
  Fly   159 DDNSSLAGTATPVGGFRSFSSMAAGLGASQRIGDQPNRPSSAMLTDFLNMEYDESTSLQRLVRSE 223

  Fly   281 -NSSNSSSSHC---------------------YG------------------------------- 292
             ::.:|.:|.|                     :|
  Fly   224 AHTPDSPASVCERDGNDRLGSVLLDAVSPGTPFGFPLVSNPDSLATPMLGGERSSRPRLPQSQQQ 288

  Fly   293 -----------QC-----------------NCIIDQI---FTGMLQSDVVCQACNGVSTT-YDPF 325
                       .|                 |.:..|:   |.|.:.:.:||..|...|.. ||.|
  Fly   289 QDEGLNRRVSSSCRSLERLHRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGCGSKSAVRYDKF 353

  Fly   326 WDISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVS 390
            ..|:|:|......|    .:|...|..|..:|.|   :.:||.:|......||..:...||:.:.
  Fly   354 DSITLNLPPQRRTG----LSLGHLLSEYITSEDL---SDVKCDSCNETTTHTKSVTFAKLPACLC 411

  Fly   391 FHLKR---FEHSALIDRKISSFIQFPVEFDMTPFM-------SEKKNAYGD-------------- 431
            .|:.|   .....:..||  .::.||....|.|:.       |:....:|.
  Fly   412 IHVARTVWLPTGQVCKRK--DYVHFPESLSMAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNG 474

  Fly   432 ----------FRFSLY---AVVNHVGTIDTGHYTAYVR---HQKDTWVKCDDHVITMASLKQVLD 480
                      |..:||   |||.|.|..::||:..|.|   .....|....|.::...|:.:||.
  Fly   475 VGGGEGFGTMFPKNLYRLLAVVVHSGEANSGHFVTYRRGSLRNAHRWYYTSDTIVREVSIDEVLS 539

  Fly   481 SEGYLLFYHK 490
            ...|||||.:
  Fly   540 VPAYLLFYDR 549

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999
		Peptidase_C19D	158..489	CDD:239125	97/526 (18%)
Usp30	NP_001284912.1	Peptidase_C19	39..>139	CDD:271592	28/108 (26%)
		UCH	<304..547	CDD:278850	57/251 (23%)
		Peptidase_C19F	<323..548	CDD:239127	57/233 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456867
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1867
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.740