Protein Alignment not and Usp30

DIOPT Version :10

• Sequence 1: NP_001401041.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 703
• Species: Drosophila melanogaster
• Sequence 2: NP_572274.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Alignment Length: 530
• Identity: 98/530 - (18%)
• Similarity: 157/530 - (29%)
• Gaps: 214/530 - (40%)

  Fly   364 LRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSR--- 425
            :.||.|.|.|||:|.::||:...|....:.....:   :....|.|:..:.... |..:|:.
  Fly    38 IAGLHNFGLTCFLNTLLQAMAACPQFIAWLQLYNN---ASPDRKSLITSMLNTL-EVVNGTHATL 98

  Fly   426 -----SPLSLHRLLHLI-WNHAKHLAGYEQQDAHEFFIATLDVLHRH--------CVKAKAEHES 476
                 ||.::.|.|:.: |     :...|:.||||.|...|..|...        |:......::
  Fly    99 RGDPYSPGAVLRALNALGW-----VIPQEEHDAHELFHVLLTCLEEEAIRPQPLGCLSDALPTDN 158

  Fly   477 KSNSSGSGSGT------------------------------------------------------ 487
            ..|||.:|:.|
  Fly   159 DDNSSLAGTATPVGGFRSFSSMAAGLGASQRIGDQPNRPSSAMLTDFLNMEYDESTSLQRLVRSE 223

  Fly   488 -NSSNSSSSHC---------------------YG------------------------------- 499
             ::.:|.:|.|                     :|
  Fly   224 AHTPDSPASVCERDGNDRLGSVLLDAVSPGTPFGFPLVSNPDSLATPMLGGERSSRPRLPQSQQQ 288

  Fly   500 -----------QC-----------------NCIIDQI---FTGMLQSDVVCQACNGVSTT-YDPF 532
                       .|                 |.:..|:   |.|.:.:.:||..|...|.. ||.|
  Fly   289 QDEGLNRRVSSSCRSLERLHRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGCGSKSAVRYDKF 353

  Fly   533 WDISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVS 597
            ..|:|:|......|    .:|...|..|..:|.|   :.:||.:|......||..:...||:.:.
  Fly   354 DSITLNLPPQRRTG----LSLGHLLSEYITSEDL---SDVKCDSCNETTTHTKSVTFAKLPACLC 411

  Fly   598 FHLKR---FEHSALIDRKISSFIQFPVEFDMTPFM-------SEKKNAYGD-------------- 638
            .|:.|   .....:..||  .::.||....|.|:.       |:....:|.
  Fly   412 IHVARTVWLPTGQVCKRK--DYVHFPESLSMAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNG 474

  Fly   639 ----------FRFSLY---AVVNHVGTIDTGHYTAYVR---HQKDTWVKCDDHVITMASLKQVLD 687
                      |..:||   |||.|.|..::||:..|.|   .....|....|.::...|:.:||.
  Fly   475 VGGGEGFGTMFPKNLYRLLAVVVHSGEANSGHFVTYRRGSLRNAHRWYYTSDTIVREVSIDEVLS 539

  Fly   688 SEGYLLFYHK 697
            ...|||||.:
  Fly   540 VPAYLLFYDR 549

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001401041.1	zf-UBP	253..310	CDD:460464
		Peptidase_C19D	365..696	CDD:239125	97/526 (18%)
Usp30	NP_572274.1	Peptidase_C19	39..>139	CDD:470612	28/108 (26%)
		Peptidase_C19F	<323..548	CDD:239127	57/233 (24%)