Protein Alignment not and Usp44

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_038934982.1
• Gene: Usp44 / 314746
• RGDID: 1308216
• Length: 731
• Species: Rattus norvegicus
• Alignment Length: 676
• Identity: 159/676 - (23%)
• Similarity: 231/676 - (34%)
• Gaps: 247/676 - (36%)

  Fly    44 CNCFECGSYGIQLYACLHCIYFGCR---GAHITSHLRSKKHNVALELSHGTLYCYACRDFIY--- 102
            ||..|      .::|||.|.:..|.   ..|...|.....|.||.|::...::||.|.|::.
  Rat    46 CNTTE------SIWACLSCSHVACGQYIQEHALKHFEESSHPVAFEVNDMYVFCYLCNDYVLNDN 104

  Fly   103 ---DARSREYAL--------------------INRKLEAKDLQKSIGWVP--------------- 129
               |.:|....|                    :|.:.::..|..|...:|
  Rat   105 TAGDLKSLRSTLSAIKGKSYPCVVQSDSVLQPVNAQADSYSLHDSTQSLPGSEDPMCTALWHRRR 169

  Fly   130 ---------WV----------PTTKETNLLLANARRR---------------------------- 147
                     |.          ..|:|..:.....:||
  Rat   170 ALMGKTFRTWFEQSPIGRKRQEQTQEKTVAKREVKRRQQELEQQMKAELECTPPRKSLRLQGLSE 234

  Fly   148 -----------------------------------------LV--RPNQTIGLRGLLNLGATCFM 169
                                                     |:  ||..|.|:.||.|||.||:|
  Rat   235 AATVEILPVQAPPPPPASPAKEKALALPPSEDGKLKRVSDSLIKRRPAVTPGVTGLRNLGNTCYM 299

  Fly   170 NCIVQALVHTPLL-----------------SDYFMSDRH----DCGSKSSH---------KCLVC 204
            |.::|.|.|..:.                 ||...|.:|    |..:.::|         |...|
  Rat   300 NSVLQVLSHLLIFRQCFLKLDLNQWLAVAASDKARSYKHSAVTDAATAAAHQLNEGQEKEKGFAC 364

  Fly   205 -------------------------------------EVSRLFQEFYSGSRSPLSLHRLLHLIWN 232
                                                 |:..|||..:||..:.:|...:||.:|.
  Rat   365 SRHPGLSSGLSGGASKGRNMELIQPREPSSPYSSLCHELHTLFQVMWSGEWALVSPFAMLHSVWK 429

  Fly   233 HAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSS---NSSSSHCYGQC 294
            ......||.||||.||....||.:.|       |.|:        :||...   .:|......|.
  Rat   430 LIPAFRGYAQQDAQEFLCELLDKIQR-------ELET--------TGTKLPALIPTSQRRLIEQV 479

  Fly   295 NCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGG----VTPKTLIDCLERYTR 355
            ..:::.||.|.|.|.|.|.|||..|.|.:||||:||:..|.....|    ..|..:.|.|.::|.
  Rat   480 LNVVNNIFHGQLLSQVTCLACNNKSNTIEPFWDLSLEFPERYQCSGKDAASQPCLVTDMLGKFTE 544

  Fly   356 AEHLGSAAKIKCSTCKSYQ-----------ESTKQFSLRTLPSVVSFHLKRFEHSALIDR-KISS 408
            .|.|.....: |..|.|.:           |:.||..:..||.|:..|||||..|...:| ||..
  Rat   545 TEALEGKIYV-CDHCNSKRRKFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGV 608

  Fly   409 FIQFPVEFDMTPF-MSEKKNAYGD--FRFSLYAVVNHVGT-IDTGHYTAYVRHQK-DTWVKCDDH 468
            .:.|....:|.|: .||..||...  |.::|.|||.|.|. ..:||||||..:.: ..||.|:|.
  Rat   609 HVVFEETLNMEPYCCSETLNALRPECFIYNLSAVVIHHGKGFGSGHYTAYCYNSEGGFWVHCNDS 673

  Fly   469 VITMASLKQVLDSEGYLLFYHKNVLE 494
            .::|.::::||.::.|:|||.:.|.|
  Rat   674 KLSMCTMEEVLRAQAYILFYTQRVTE 699

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999	16/65 (25%)
		Peptidase_C19D	158..489	CDD:239125	121/421 (29%)
Usp44	XP_038934982.1	zf-UBP	43..104	CDD:396634	18/63 (29%)
		UCH	288..693	CDD:395355	120/420 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910