Protein Alignment not and Usp20

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001101297.1
• Gene: Usp20 / 311856
• RGDID: 1305621
• Length: 915
• Species: Rattus norvegicus
• Alignment Length: 689
• Identity: 151/689 - (21%)
• Similarity: 227/689 - (32%)
• Gaps: 275/689 - (39%)

  Fly    46 CFECGSYGIQLYACLH--CIYFGCRGA---HITSHLRSKKHNVALELSHGTLYCYACRDFIYDAR 105
            |..||..|..|:|||.  |.|.||..:   |.:.|.:.|:||:.:.|:...::||||
  Rat    30 CQSCGVAGPNLWACLQVTCPYVGCGESFADHSSIHAQVKRHNLTVNLTTLRVWCYAC-------- 86

  Fly   106 SREYALINR----------KLEAKDLQKSIGWVPWVP---------TTKETNLLLANARRRLVRP 151
            .||..|..|          :|..:|.......:..||         .:::.:|          :|
  Rat    87 EREVFLEQRLAVHLPSSSARLSEQDSPPPCHPLKAVPIAVADEGESESEDDDL----------KP 141

  Fly   152 NQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGS--KSSHKCLVCE-VSRLFQEF 213
            .   ||.|:.|||.:|:||..:|||.:.|.|:.:|:    :||.  ::..|..:|: ..:|..|.
  Rat   142 R---GLTGMKNLGNSCYMNAALQALSNCPPLTQFFL----ECGGLVRTDKKPALCKSYQKLISEV 199

  Fly   214 YSGSRS----PLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLH----------------- 257
            :...|.    |.||...:.|:   .....||.|||..||....:|.||
  Rat   200 WHKKRPSYVVPTSLSHGIKLV---NPMFRGYAQQDTQEFLRCLMDQLHEELKEPMVAAVAALTDA 261

  Fly   258 -----------RHCVKAKAEHE------SKSNSSGSGSG-------------------------- 279
                       |...::.:|.|      |.....|.|.|
  Rat   262 RDSDSSDTDERRDGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSKAEMELLISDEAGRAISEKE 326

  Fly   280 -------------TNSS--------------------------------------------NSSS 287
                         |||.                                            .|||
  Rat   327 RMKDRKFSWGQQRTNSEQVDEDADVDTAMASLDEQSREAQPPSPRPTSPCQTPEPDNEVHIRSSS 391

  Fly   288 SHC-----------------------------------------------YGQCNCIIDQIFTGM 305
            ..|                                               |   ..:|..:|.|.
  Rat   392 RPCSPVHHHEGHTKLSSSPPRASPVRMGPSYVLKKAQVPSTGGRRRKEQSY---RSVISDVFNGS 453

  Fly   306 LQSDVVCQACNGVSTTYDPFWDISLDL------------------------GETTTHGG------ 340
            :.|.|.|..|:.||||.:.|.|:||.:                        |::.:..|
  Rat   454 VLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYSSQGWLAFIV 518

  Fly   341 ---------VTPK-------TLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVV 389
                     .||.       ||.|||..:..|:.|.......|..||..:...|...:..||.::
  Rat   519 EYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEIL 583

  Fly   390 SFHLKRFEHSALIDRKISSFIQFPVE-FDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTA 453
            ..|||||.|..:...|:||.:.||:| .|:.||::::..:... .:.|.:|:.|.||..:|||.|
  Rat   584 CVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQVT-TYDLLSVICHHGTAGSGHYIA 647

  Fly   454 YVRHQ-KDTWVKCDDHVITMASLKQVLDSEGYLLFYHKN 491
            |.::. ...|.:.||..:|......|.:.|.|:|||.|:
  Rat   648 YCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLFYRKS 686

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999	22/61 (36%)
		Peptidase_C19D	158..489	CDD:239125	115/549 (21%)
Usp20	NP_001101297.1	UBP14	<8..>260	CDD:227532	68/257 (26%)
		UCH	145..683	CDD:395355	114/548 (21%)
		DUSP	703..786	CDD:197831
		DUSP	811..895	CDD:197831

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910