Protein Alignment not and Usp13

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001101135.1
• Gene: Usp13 / 310306
• RGDID: 1306044
• Length: 858
• Species: Rattus norvegicus
• Alignment Length: 565
• Identity: 95/565 - (16%)
• Similarity: 160/565 - (28%)
• Gaps: 257/565 - (45%)

  Fly   149 VRPNQTIGLRGLLNLGATCFMNCIVQALV-----------HTPLLSDY--------FMSDRHDCG 194
            ::|....|..||.|||.:|:::.::||:.           :.|.:.||        |.:.....|
  Rat   325 LKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLPRIFDYSPLDPTQDFNTQMTKLG 389

  Fly   195 ---------------------SKSSHKCLVCEVS-RLFQEFYSGSRSPLSLHRLLHLIWNHAKHL 237
                                 .|..||.....:| |:|:.|.|.|....|.:|
  Rat   390 HGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSHPEFSSNR------------ 442

  Fly   238 AGYEQQDAHEFFIATLDVLHRH------------------------------------------- 259
                ||||.|||:..::::.|:
  Rat   443 ----QQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEERIQCCQTRKVRYTERVDYLMQLPVAM 503

  Fly   260 --------------------------------------CVKAKAEHESKSNSSGSGSGTNSSNSS 286
                                                  |::|.||.::..:...|.....|:...
  Rat   504 EAATNKDELIAYELMRREAETNRRPLPELVRAKIPFSACLQAFAEPDNVDDFWSSALQAKSAGVK 568

  Fly   287 SSHCYGQCNCIIDQI--FTGMLQ---------------SDVVCQACNGVSTTYDPFWDIS----- 329
            :|........::.||  ||..|.               .|:......|:....:...|||
  Rat   569 TSRFASFPEYLVVQIKKFTFGLDWVPRKFDVSIDMPDLLDISHLRARGLQPGEEELPDISPPIVI 633

  Fly   330 ---------------LDLGETT-----------------------THGGVTPKTLIDCLERYTRA 356
                           .|:.|::                       |...|....:|..:|....|
  Rat   634 PDDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNTGAEVAFNWIIVHMEEPDFA 698

  Fly   357 EHL------GSAAK---------------IKCSTCKSYQESTKQFSLRTLPSVVSFHLKR----- 395
            |.|      |:.|.               :...|...:|.|....:|:    ..:.:|:|
  Rat   699 EPLAIPGYGGAGASAFGATGLDNQPPEEIVAIITAMGFQRSQAVQALQ----ATNHNLERALDWI 759

  Fly   396 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAY--------------GDFRFSLYAVVNHVGTI 446
            |.|.           :|..:.|....|....||.              |...:.|:|.::|:||.
  Rat   760 FSHP-----------EFEEDSDFVIEMENNANANIMSEAKPEGPRVKDGSGMYELFAFISHMGTS 813

  Fly   447 D-TGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHK 490
            . :|||..::: ::..||..:||.: .||.:...|. ||:.||.:
  Rat   814 TMSGHYVCHIK-KEGRWVIYNDHKV-CASERPPKDL-GYMYFYRR 855

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999
		Peptidase_C19D	158..489	CDD:239125	92/553 (17%)
Usp13	NP_001101135.1	UBP14	28..856	CDD:227532	95/565 (17%)
		zf-UBP	209..282	CDD:280334
		Peptidase_C19B	335..854	CDD:239123	92/552 (17%)
		UBA1_UBP13	650..698	CDD:270567	6/47 (13%)
		UBA2_UBP5	723..764	CDD:270569	8/55 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910