DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and Usp21

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_038947.2 Gene:Usp21 / 30941 MGIID:1353665 Length:566 Species:Mus musculus


Alignment Length:357 Identity:105/357 - (29%)
Similarity:161/357 - (45%) Gaps:40/357 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQE-----FYSGSR 218
            ||.|||.|||:|.::|.|..|..|.|:.:  |.|...:........|::..|.:     ::..|.
Mouse   213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCL--RRDFRQEVPGGGRAQELTEAFADVIGALWHPDSC 275

  Fly   219 SPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRH---------------------CVK 262
            ..::..|...:...:....:||.||||.||....::.||..                     |..
Mouse   276 EAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILASGPVPSPPCRG 340

  Fly   263 AKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWD 327
            ..|.||....|...    .::.....:...:.:.|:| :|.|.|:|.:.||||...|||::.|.|
Mouse   341 GGALHEEPELSDDD----RANLMWKRYLEREDSKIVD-LFVGQLKSCLKCQACGYRSTTFEVFCD 400

  Fly   328 ISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFH 392
            :||.:.:....||..  :|.||...:|:.|.|.|.....|..|:....|||:.:::..|.::..|
Mouse   401 LSLPIPKKGFAGGKV--SLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLH 463

  Fly   393 LKRFEHSALIDRKISSFIQFPVE-FDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYVR 456
            |.||..|....:|.|..:.||:: ..:..|.|:|.   |...:.|||:.||.|::..|||||..|
Mouse   464 LNRFSTSRGSIKKSSVGVDFPLQRLSLGDFASDKA---GSPVYQLYALCNHSGSVHYGHYTALCR 525

  Fly   457 HQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 488
            .|.. |...:|..::..|..||..||||:|||
Mouse   526 CQTG-WHVYNDSRVSPVSENQVASSEGYVLFY 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 105/357 (29%)
Usp21NP_038947.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103
Nuclear export signal. /evidence=ECO:0000250 134..152
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..169
UCH 212..556 CDD:278850 103/355 (29%)
Peptidase_C19R 213..557 CDD:239139 105/357 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..349 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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