DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and Usp42

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001099379.1 Gene:Usp42 / 288482 RGDID:1305231 Length:1325 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125
Usp42NP_001099379.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..86
Peptidase_C19E 109..409 CDD:239126
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..502
Herpes_BLLF1 <423..776 CDD:282904
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 539..590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..674
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 718..780
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 802..849
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 879..1032
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1146..1259
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1290..1325
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D929408at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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