DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and ubp14

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_596085.1 Gene:ubp14 / 2541157 PomBaseID:SPBC6B1.06c Length:775 Species:Schizosaccharomyces pombe


Alignment Length:676 Identity:128/676 - (18%)
Similarity:216/676 - (31%) Gaps:242/676 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TGCRHYQSYVKEHSYDTFRVIDAYFAACVNRDARER--KAIHCNCFECG--SYGIQLYACLHCIY 64
            |.|.|..:..:..:|    |.:...|.|...|..|.  ..:.|....||  .||           
pombe   151 TTCDHIINLPENETY----VTNLDNATCSKCDLAENLWMCLTCGALSCGRKQYG----------- 200

  Fly    65 FGCRGAHITSHLRSKKHNVALEL------SHGTLYCYACRDFIYDARSREYAL-----------I 112
            .|....|..||.....|.:|::|      ....:|||:|.:...|...:.:.|           .
pombe   201 GGGGNGHALSHYDDTGHPLAVKLKSISPDGQADIYCYSCDEERIDPNIKTHMLNFGIDIAKLNKT 265

  Fly   113 NRKLEAKDLQKSIGWVPWVPTTKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQAL- 176
            .:.|....|::::.|.  ...::|.     :|.:||..|    ||.||.|||.:|::...:|:| 
pombe   266 EKSLAELQLEQNLNWD--FGASEED-----DASKRLFGP----GLTGLKNLGNSCYLASTMQSLF 319

  Fly   177 ------VHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAK 235
                  :|...|.:.:.|   .|.:.::.  |.|::.:|.....||..|..|...||:   |.:.
pombe   320 SIKEFAIHELNLFNTYNS---VCQTPTTD--LQCQLGKLADGLVSGKFSKPSKIGLLN---NPSS 376

  Fly   236 HLAGY-----------------------EQQDAHEFFIATLDVLHR------------------- 258
            .:..|                       :||||:||.:..|..:.:                   
pombe   377 SILPYQDGLRPFMFKDVVGQGHSEFGTSQQQDAYEFLLYLLGKIRKSSIAKTDITKIFDFETEQK 441

  Fly   259 -HCVKAKAEHESKSNSSG---SGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSD---VVCQACN 316
             .|:..|....|..:|.|   :..............|.:.:  |||.....:|.|   ..|:||.
pombe   442 LSCLSCKRVRYSSFSSQGLTLTVPRVKIGEIEGEQIYEEVS--IDQCLDATIQPDQMEYTCEACK 504

  Fly   317 GVSTTYDPFWDISLDLGETTTHGGVT-PKTLI------------------------DCLERYTR- 355
            .             .||.|||....: ||.||                        |.:..:.| 
pombe   505 S-------------KLGATTTTAMKSFPKVLILQANRFDLQGYQVKKLSIPIIVNEDGIYNFDRL 556

  Fly   356 --AEHLGSAAKI--KCSTCKSYQESTKQFSLRTLPSVVSFHLKR-----------------FEH- 398
              .:|......:  |..|.:..|.:.:|......|.|   ..:|                 ||| 
pombe   557 MAKDHPNDEDYLPEKTETIEWNQSAIEQLQAMGFPLV---RCQRALLATGNSDTETAMNWLFEHM 618

  Fly   399 -------------------SALIDRKISSFIQF-------------------------------- 412
                               |::.:..:.|..:|                                
pombe   619 EDPEIDKPIEVSELLPKADSSVSEENVQSLCEFGFTVAQARKGLLESNNNIERAVDWILNHPDES 683

  Fly   413 ----PVEFDMTPFMSEKKNAYGD----FRFSLYAVVNHVG-TIDTGHYTAYVRHQ---KDTWVKC 465
                |:|...:...:|...::..    ..::|.|:::|.| :...|||.|::|.:   |..||..
pombe   684 FEEPPLEGSDSSIKNENMGSWESTNVPVNYNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLF 748

  Fly   466 -DDHVITMASLKQVLDSEGYLLFYHK 490
             |:.|:.:|||::. .:.||:..:.:
pombe   749 NDEKVLQVASLEEA-KTTGYVYLFER 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 15/64 (23%)
Peptidase_C19D 158..489 CDD:239125 91/498 (18%)
ubp14NP_596085.1 UBP14 1..774 CDD:227532 128/676 (19%)
ZnF_UBP 24..77 CDD:197632
zf-UBP 174..247 CDD:280334 20/83 (24%)
Peptidase_C19B 301..772 CDD:239123 91/497 (18%)
UBA1_spUBP14_like 578..624 CDD:270568 8/48 (17%)
UBA2_spUBP14_like 642..680 CDD:270483 2/37 (5%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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