DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and ubp11

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_595689.1 Gene:ubp11 / 2540714 PomBaseID:SPBC19C2.04c Length:350 Species:Schizosaccharomyces pombe


Alignment Length:360 Identity:96/360 - (26%)
Similarity:154/360 - (42%) Gaps:75/360 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 RRLVRPNQTIGLRGLLNL-GATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRL 209
            :|||:   ...::||.|: |..||:||::|:|.....|.:..   :..|.|.:    |...:..|
pombe    40 KRLVK---NASIKGLYNVSGNDCFLNCVLQSLASQESLLEIL---KLRCSSST----LYATLYEL 94

  Fly   210 FQEFYSGSRSPL---SLHRLLHLIWNHAKHLAGYEQQDAHEF---FIATLDVLHRHCVKAKAEHE 268
            .|:..||..:|:   |....|.:..|  |.|....||||.||   .:.||::...|..|     .
pombe    95 LQKLNSGPGNPITPGSFLNSLEIATN--KKLVRSIQQDAQEFLQHLVETLELQKPHTYK-----W 152

  Fly   269 SKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLG 333
            ||..|..                      :|..|.|.::..|.|..|..:|.:|.....|.|.| 
pombe   153 SKVLSFP----------------------VDSPFIGTMEQKVQCCQCLAISISYSTATSIQLCL- 194

  Fly   334 ETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTC-KSYQESTKQFSLRTL-----PSVVSFH 392
             ...:.|.:..:|:..:|. .|.:|:   :..||.:| ||..:.:|...:||:     |:::...
pombe   195 -PPEYSGNSNVSLLSLMEA-DREQHI---SDYKCDSCFKSSPKHSKTSCIRTVDWKNPPTILQIQ 254

  Fly   393 LKRFEHS--ALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYV 455
            |:|..::  .|....:|  |.||.:..:       ||.:   .:.|.:::.|.|::..|||..| 
pombe   255 LERTSYTCQGLTRNNVS--ISFPSKLIL-------KNKH---HYILRSLITHSGSVTYGHYLCY- 306

  Fly   456 RHQKDTWVKCDDHVITMASLKQVLDS--EGYLLFY 488
            |.|.|.|.|.:|.:||.:||.:.|..  ...||||
pombe   307 RLQDDIWWKANDSLITKSSLNEALSQTRSACLLFY 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 93/348 (27%)
ubp11NP_595689.1 Peptidase_C19 50..342 CDD:239072 93/347 (27%)
UCH 50..341 CDD:278850 91/345 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1867
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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