DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and H34C03.2

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001293696.1 Gene:H34C03.2 / 177437 WormBaseID:WBGene00019259 Length:980 Species:Caenorhabditis elegans


Alignment Length:588 Identity:110/588 - (18%)
Similarity:168/588 - (28%) Gaps:255/588 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 TIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFM-----SDRHDCGSKSSHKCLVCEVSRLFQEF 213
            |.|..||.|||.||||....|.|.:.|.|.:||:     :|.::.....:|..|...|..|.:..
 Worm   351 TPGACGLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELMKGM 415

  Fly   214 YSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHR--HCVKAKAEHESKSNSSGS 276
            :||..:.::..:...:|...|....||.||||||.....||.||.  :.:|.|...|.....:..
 Worm   416 WSGDYASINPRKFKSIIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIKKKPYIEDSDEDAKL 480

  Fly   277 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL--------- 332
            .....::.|...:.....:.|:|.:. |.|:|.::|..|..:|..:|||..:||.|         
 Worm   481 PEAEYAAKSWEVYKMRNDSIIVDTLH-GQLKSTLICPVCEKISIKFDPFGYLSLPLPPKEQIVKQ 544

  Fly   333 -------------------------------------------------------------GE-- 334
                                                                         |:  
 Worm   545 TVIVMFLTRKWAKFSLGITDTTTVEEAERLMLDKLQPEQQHHFVFFHVPSQYHDDITMMRPGDRV 609

  Fly   335 -------------------------------------------------------------TTTH 338
                                                                         ||.|
 Worm   610 RMPGREVYVAEVEHDLQVKGTRLFVAYNRIKLVRSASLPMIYSLPTGYPLTRGFLNDHVFSTTKH 674

  Fly   339 GGVTPKT---------------------------------------------------------- 345
            ..:.||.                                                          
 Worm   675 FFINPKAVAELGGGNSNDDDSMSGSNSADEREPYKLFVGPPGSTASLPIPPTDDPIPFPDENSHD 739

  Fly   346 ----------------------------------------LIDCLERYTRAEHLGSAAKIKCSTC 370
                                                    |.:.|:.:|..|.||......|..|
 Worm   740 IYSNFLQIVFQWKDLKIFNQYKGNELIEREMTVSTRRKVLLQETLDWFTTKEQLGEQDSWYCPQC 804

  Fly   371 KSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVE-FDMTPFM---SEKKNAYGD 431
            |.::.:|||.:|..||.::..|||||:::.....|::..:..||. .|:|..:   :.:|..|  
 Worm   805 KKHERATKQLALWKLPEILILHLKRFQYTKWSREKLTWEVVIPVRGLDLTDKVANPNHEKAIY-- 867

  Fly   432 FRFSLYAVVNHVGTIDTGHYTAY---VRHQKDTWVKCDDHVI--TMASLKQVLDSEGYLLFYHKN 491
               .|.||..|.|::..|||||.   .|.||  |...:|...  |....:....|:.|:|.|.:.
 Worm   868 ---DLIAVSRHYGSLSGGHYTAIGYNDREQK--WFDFNDSSANPTYPPAEPYESSDPYILVYRRR 927

  Fly   492 VLE 494
            .|:
 Worm   928 KLD 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 106/577 (18%)
H34C03.2NP_001293696.1 DUSP 51..135 CDD:197831
Peptidase_C19 356..>583 CDD:271592 54/227 (24%)
Peptidase_C19 <777..925 CDD:271592 46/154 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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