DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and cyk-3

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001022992.1 Gene:cyk-3 / 175853 WormBaseID:WBGene00000874 Length:1178 Species:Caenorhabditis elegans


Alignment Length:681 Identity:117/681 - (17%)
Similarity:192/681 - (28%) Gaps:321/681 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 IYDARSREYALINRKLEAKDLQKSIGWVPWVPTTKETNLLLANARRRLVRPNQTIGLRGLLNLGA 165
            :.:.|.|...:...:|.|....|.|    ...:|..:|..|:::..   ||    |..||:|.|.
 Worm   524 LLEVRERGTGVWPEELRASLSGKQI----TAASTLSSNAQLSDSSG---RP----GAVGLVNYGN 577

  Fly   166 TCFMNCIVQALVHTPLLSDYFMSD------------RHDCGSKSSHKCLVCEVSRLFQEFYSGSR 218
            .|:.|..:|.|.....|:.||:.:            |.|....:      .|.::|.:|.::..:
 Worm   578 FCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETT------IEYAKLLREMWAAKK 636

  Fly   219 SPLSLHRLLHLIWNHAKHLAG-----YEQQDAHEFFIATLDVLHRHCVKA-KAEHESKSNSSGSG 277
            ..::.:.     :|.|..|:.     .||.|..||....||.||....:: |:.|.|...|.|:.
 Worm   637 KNIAPND-----FNDAIRLSSDMFECSEQHDCQEFVAFLLDQLHTSMYESNKSLHPSPEESEGTD 696

  Fly   278 SGTNSSNSSSSHC----------------YGQCN-CIIDQIFTGMLQSDVVCQACNGVSTTYDPF 325
            |...|.:|.....                |.:.| .::.|:|||.|:|.::|:.|...|:.::||
 Worm   697 SNKLSDSSKKKEADKEEADEEKAERSWTEYEKQNESLVTQLFTGQLRSRLICRTCQSSSSVFEPF 761

  Fly   326 WDISLDLG--------------------------------------------------------- 333
            ..:||.:|                                                         
 Worm   762 TSLSLPIGFEDVDLYQVIVVHRDGRIPRRYGFRLSRDSKVGNLREVVAVSSGISMSHLTIQCMSS 826

  Fly   334 -------------------------------------ETT------------------------T 337
                                                 |:|                        |
 Worm   827 KGTLMSRSPNHRSSNLRDELPLSSFPSGARLYALELPESTGEDQWRVAMHRKLQYNHEPYILGST 891

  Fly   338 HGGV------------------------------------------------------------- 341
            .|.:                                                             
 Worm   892 AGFIVSRFGLPLIVGLDEEVTGKKLYEDVMYQMHRFMEHSVNSSSSRAHDPCEDENSGYPFTLCL 956

  Fly   342 ----------------------------------------------------------------- 341
                                                                             
 Worm   957 VDPNYEWCGQCPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYLRYNHSQEQACEDDPSVA 1021

  Fly   342 -------TPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHS 399
                   .|.:|..|:|:::..|.|.:|  |:|..|:......|..::..||..:..||||||..
 Worm  1022 ETWSRHFAPSSLEHCIEKFSCPETLDAA--IQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFL 1084

  Fly   400 ALIDR--KISSFIQFPVE-FDMTPFMSEKK-NAYGDFRFSLYAVVNHVGTIDTGHYTAYVRHQKD 460
            ....|  |....:.||:: ||..||:.:.. |.|     ...|:.||.|.:..||:.||.:..:|
 Worm  1085 REQGRMGKCKRTVNFPLKHFDPAPFVDKPDGNTY-----ECIALANHYGQLSCGHFIAYAKSNED 1144

  Fly   461 TWVKCDDHVITMASLKQVLDSEG-YLLFYHK 490
            .|:..:|..:...|.::| |.:| |||||.:
 Worm  1145 KWLLLNDCSVREVSEEEV-DKQGAYLLFYER 1174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 0/1 (0%)
Peptidase_C19D 158..489 CDD:239125 104/621 (17%)
cyk-3NP_001022992.1 EFh_PEF 23..201 CDD:330173
EF-hand_7 177..241 CDD:316058
Peptidase_C19 322..1175 CDD:321984 117/681 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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