DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and F07A11.4

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001364591.1 Gene:F07A11.4 / 174780 WormBaseID:WBGene00008547 Length:1135 Species:Caenorhabditis elegans


Alignment Length:695 Identity:110/695 - (15%)
Similarity:175/695 - (25%) Gaps:370/695 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GLRGLLNLGATCFMNCIVQALVHTPLLSDYFM--------SDRHDCGSKSSHKCLVCEVSRLFQE 419
            |..||.|:|.|||||.::|.||:...|.:||:        ::.:..||:.       .:::.|.:
 Worm   421 GYTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEG-------RLAKAFAD 478

  Fly   420 F----YSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNS 480
            |    :||.:..:...::.:::...|...|.:.|.|||||....||.||....:.|.:..:.:..
 Worm   479 FMHQMWSGHQKAIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTGTVE 543

  Fly   481 SGSGSGTNSSNSS-SSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDP------------- 531
            |......:.||.: .:|.....:..:| :|.|.|:|.|.|..|:.||.|:||             
 Worm   544 SHGRHDLDVSNEAWKNHILRNDSIFVD-LFHGQLKSHVQCPNCDRVSITFDPFVYLPVPFPKNKQ 607

  Fly   532 -----FWDI---------------------------------------------------SLDL- 539
                 ||.:                                                   |||: 
 Worm   608 STDLIFWPLENQTKPYKLTVSYSTEGTVADFLSVVSETVRVPTRNLRACEAICHKFDKIYSLDMK 672

  Fly   540 ----------------------------------------------------------------- 539
                                                                             
 Worm   673 VSDIVSPDRLFVFQTHDEMEFNEEIVILHVLQRELYRKNTKHACHECGNSKLKLKACEECYDAVY 737

  Fly   540 ----------------------------------------------------------------- 539
                                                                             
 Worm   738 CSKECQVANWSTGGHREECSKRKPSETVGHPLIVSLPRSQLTYQHLYRVLEAKSRHTVTLFQQPQ 802

  Fly   540 ----------------------------------GETTTHGGVT-----------PKT------- 552
                                              ||:::...|:           |:|       
 Worm   803 YESEGSEGDSLQAPSRSIKKRNGVGAPPTFLQPPGESSSSSSVSSTPRRRSVAAEPRTKNQKMFE 867

  Fly   553 ----------------------------------------------------------------- 552
                                                                             
 Worm   868 IRKLSGQNDSFGSHSISDDEACQSLESGGYVSVNWINQRNGKPYITIENRKDIDVDVEKSRQMNS 932

  Fly   553 -----------------LIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHL 600
                             |...|:.::..|.|.......|||||...|:||:..|..||.|:...|
 Worm   933 RNMNGYVKSNNSETNPHLTQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQL 997

  Fly   601 KRFEHSALIDR-------KISSFIQFPVE-FDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGH 657
            |||.::|...:       |.:..:::|:| .||:||::|.........:.|..||.|.|....||
 Worm   998 KRFVYTAFTYQSSMARRSKDTRSVEYPLESLDMSPFLAETSPHPNSTMYDLTGVVCHSGNSYFGH 1062

  Fly   658 YTAYVR-------HQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 695
            |.:..|       ..|..|...||..:...|...:...:.|||||
 Worm  1063 YISMGRLADFDSSKTKIEWRNFDDSTVARQSTSTLQTEDAYLLFY 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464
Peptidase_C19D 365..696 CDD:239125 109/693 (16%)
F07A11.4NP_001364591.1 UBP12 <401..1110 CDD:227847 110/695 (16%)
zf-MYND 716..756 CDD:460312 0/39 (0%)
Blue background indicates that the domain is not in the aligned region.

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