DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and T24B8.7

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_495931.4 Gene:T24B8.7 / 174440 WormBaseID:WBGene00011980 Length:2938 Species:Caenorhabditis elegans


Alignment Length:492 Identity:90/492 - (18%)
Similarity:156/492 - (31%) Gaps:215/492 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 RRLVRPNQ--TIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRH-----DCGSKSSHKCLV 203
            |.::|..|  .:|::   |.|.||:||.::|.|||.|.||...::.::     ..|..::  .|:
 Worm  1808 RPIIRGRQFDKVGMK---NDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTA--ALL 1867

  Fly   204 CEVSRLF-----------------QEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIA 251
            ||:.|:|                 :||......||          |..:|      .||.:|:..
 Worm  1868 CELQRVFAQLNFAQCQAIVPEGLWKEFRFEPDMPL----------NTKQH------HDAIDFYSI 1916

  Fly   252 TLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQI---------FTGMLQ 307
            .||                                      :|:.::.::         |.|...
 Worm  1917 LLD--------------------------------------KCDNVLKKLELPPLFQNRFFGKYS 1943

  Fly   308 SDVVCQAC-NGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCK 371
            .:.:|..| :...:..:.|..|||.|         :...|.:.||.:..|..:.......|..|.
 Worm  1944 YEKICYGCWHRYKSPDEEFNCISLAL---------SGDNLEEALENFLAAHVMEGENAYHCEKCD 1999

  Fly   372 SYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFIQFPVEFDMTPFMSEKKNA------ 428
            ..:.:..:.|...|||.::..||||.:..:  :.||.:...:||.|.||||:|:..::.      
 Worm  2000 EKKTTLNRTSFLELPSTMTIQLKRFTYDLVNNMIRKDNQLFRFPFEIDMTPYMTTSRHVPDEHVQ 2064

  Fly   429 -------YGD--------------------------------------FR--------------- 433
                   ||:                                      ||               
 Worm  2065 DLFDEMLYGNGEADEAPSPPHKNGVAEKPNLGSGSASTPSLESAQKKMFRRHRSSTMRLSQSFAN 2129

  Fly   434 --------------FSLYAVVNHVGTIDTGHYTAYVRHQKD---------TWVKCDDHVITMASL 475
                          :.|..|:.|.|....|||.::::.:::         .|...:|.:::..|.
 Worm  2130 TSGFDTPSQQKPLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSF 2194

  Fly   476 KQVLD--------SEG--------------YLLFYHK 490
            ..:.|        .||              |:|||.|
 Worm  2195 NNIEDLWYGGTFTQEGVFIGLDERVRHWNAYVLFYEK 2231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 84/475 (18%)
T24B8.7NP_495931.4 UBA 133..168 CDD:197551
peptidase_C19C 1819..2234 CDD:239124 87/481 (18%)
UCH 1819..2229 CDD:278850 84/477 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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