Protein Alignment not and usp-39

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_494298.1
• Gene: usp-39 / 173606
• WormBaseID: WBGene00017280
• Length: 602
• Species: Caenorhabditis elegans
• Alignment Length: 479
• Identity: 112/479 - (23%)
• Similarity: 185/479 - (38%)
• Gaps: 99/479 - (20%)

  Fly    56 LYACLHC-IYFGCRG--AHITSHLRSKKHNVALELSHGTLYCYACRDFIYDARSREYALINRKLE 117
            :|||:.| .||..||  .|..:|.....|:|.|.|.  ||..|...|        .|.:|:..||
 Worm   164 VYACMVCGKYFQGRGTNTHAYTHALETDHHVFLNLQ--TLKFYCLPD--------NYEVIDPSLE 218

  Fly   118 AKDLQKSIGWVPWVPTTKETNLLLANARRRLVR--PNQTI--GLRGLLNLGATCFMNCIVQALVH 178
              |::..:     .||..:..:...:.:.::||  .:.|.  |:.||.|:.|..:.|.|:|||..
 Worm   219 --DIKYVL-----KPTYTKEMIASIDKQSKMVRAYDDSTYFPGVVGLNNIKANDYCNAILQALSA 276

  Fly   179 TPLLSDYFMSD------RHDCGSKSSHKCLVCEVSRLFQEFYS--GSRSPLSLHRLLH-LIWNHA 234
            ...|.::|:.:      :...|.|.:  .|......|.::.::  ..|:.:|.|.:|. ::....
 Worm   277 VRPLRNWFLKESNYTSIKRPPGDKLT--LLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSN 339

  Fly   235 KHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIID 299
            |.....:|.||.:|.:..|..||                    |..|.::...|        ||.
 Worm   340 KKFQFIKQNDAADFMLFLLTTLH--------------------SALNGTDKKPS--------IIS 376

  Fly   300 QIFTGMLQ--SDVVCQACNGVSTTY--------------DPFWDISLDLGETTTHGGVTPKTLID 348
            :.|.|.::  |..|..|.:.....|              .||..::|||.....:..|..:.:|.
 Worm   377 KTFRGRMRQYSRRVIPAEDTDEEKYMKLRMPEYQEKVIESPFLYLTLDLPSAPLYRDVQLQNIIP 441

  Fly   349 CLERYTRAEHLGSAAKIKCSTCKSY-----QESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISS 408
            .:...|..|      |....|.|.|     ....|:|.|..||..:....|||:.:.....|..:
 Worm   442 QVPLSTLLE------KFDGKTEKEYPTYNDNNIMKRFELLQLPDFLIITYKRFQKNQWFVEKNPT 500

  Fly   409 FIQFPV-EFDMTPFMSEKKNAYGDFRFSLY---AVVNHVGTIDTGHYTAYVRHQ-KDTWVKCDD- 467
            .:.||: ..|....::  |:|..:.:::.|   |.|.|.||...|:|...:.|: ...|.:.:|
 Worm   501 IVNFPIANVDFYDCLA--KDARANHKYTTYDLVANVVHEGTFKDGNYRIQIVHEGSGKWFELEDL 563

  Fly   468 HVITMASLKQVLDSEGYLLFYHKN 491
            ||..:.....|| :|.|:..:..|
 Worm   564 HVKDLLPQMIVL-AESYIQIWRLN 586

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999	18/49 (37%)
		Peptidase_C19D	158..489	CDD:239125	82/366 (22%)
usp-39	NP_494298.1	Peptidase_C19M	137..584	CDD:239134	111/475 (23%)
		UCH	255..583	CDD:278850	82/366 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910