DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and usp31

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:XP_002932037.2 Gene:usp31 / 100492761 XenbaseID:XB-GENE-920956 Length:1248 Species:Xenopus tropicalis


Alignment Length:656 Identity:117/656 - (17%)
Similarity:175/656 - (26%) Gaps:328/656 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 NARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDR---------------HD 399
            |.|.|...| :..||.||.|.|.|||||.::|.|.:|.|.:::...::               ||
 Frog    83 NERSRPPSP-RVPGLSGLKNHGNTCFMNAVLQCLSNTDLFAEFLGLEQYKEAPESPLASPGGTHD 146

  Fly   400 CGSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLH 464
            .|..:.      ::::|.:..::...:|........::..:|....|..|.||.||.:..||.:|
 Frog   147 RGEVTE------QLAKLLRSLWTLEYTPQHSREFKAIVSRNALQYRGTSQHDAQEFLLWLLDRVH 205

  Fly   465 RH---CVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVS 526
            ..   .||.|.....:.:.:|.|....||.:           .:.::|....:|.:.|..|...|
 Frog   206 EDLNVVVKHKPRPPLEEDLTGEGPTFPSSGT-----------FVQELFQAQYRSSLTCPHCQKQS 259

  Fly   527 TTYDPFWDISL------------------------------------------------------ 537
            .|:|||..|||                                                      
 Frog   260 NTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVGIPLSGNVGRLREAISQETKIPFDQI 324

  Fly   538 ---------------DLGETTT------------------------------------------- 544
                           |..:..|                                           
 Frog   325 VITEMYFDGFHRSFFDTDDLDTIHESDCLFAFETPETFPSEGILSQRAICVNNNQNYVRHGTDQH 389

  Fly   545 ---------------------------------HG------------------------------ 546
                                             ||                              
 Frog   390 RLYSSGSVRNPVNRCSTSDRIVLLVCNRAYSGQHGKRFGQPFVLHLERNITWDILQKEILEKMQY 454

  Fly   547 ---------------------GVT----------------------------------------- 549
                                 |:|                                         
 Frog   455 YLRPTACVQVCPFSLRVVTAVGITYLLPQEEKPLCHPTVERALKSCGPGGAAHVKLVVEWDRETK 519

  Fly   550 ---------------------------PK--TLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTK 585
                                       |:  ||..|...||:.|.|......:|..||..|:.:.
 Frog   520 EYLFGSTEEEYVPDAESVRLQREIHHQPQCCTLAQCFHLYTKEEQLAPGNAWRCPHCKQLQQGSI 584

  Fly   586 QFSLRTLPSVVSFHLKRFEHSALIDR--KISSFIQFPVE-FDMTPFMSEK--------------K 633
            :.||.|||.|:..|||||....  ||  |:.:.::||:. .||||.:.::              :
 Frog   585 KLSLWTLPDVLILHLKRFRQDG--DRRLKLQNMVRFPLTGLDMTPHVVKRSQSSWSLPSHWSPWR 647

  Fly   634 NAYG------DFRFSLYAVVNHVGTIDTGHYTAYVRHQKD-TWVKCDDHVITMASLKQVLDSEGY 691
            ..|.      ||.:.||||.||.||:..||||||.::..| .|...||..:.......|.....|
 Frog   648 RPYSLGRDPEDFIYDLYAVCNHHGTMQGGHYTAYCKNSVDGLWYCFDDSDVQPLPEDDVCAPTAY 712

  Fly   692 LLFYHK 697
            :|||.:
 Frog   713 ILFYQR 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464
Peptidase_C19D 365..696 CDD:239125 110/638 (17%)
usp31XP_002932037.2 UBP12 <92..719 CDD:227847 113/646 (17%)
PTZ00449 <965..1245 CDD:185628
Blue background indicates that the domain is not in the aligned region.

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