DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and usp15

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_012814096.1 Gene:usp15 / 100158604 XenbaseID:XB-GENE-1008519 Length:984 Species:Xenopus tropicalis


Alignment Length:659 Identity:116/659 - (17%)
Similarity:189/659 - (28%) Gaps:324/659 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 RPNQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--------CGSKSSHKCLVCEV 206
            |.|:..||.||.|||.|||||..:|.|.:||.|::||::|::.        .|.:..   :....
 Frog   280 RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGE---IAKSY 341

  Fly   207 SRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVK-AKAEHESK 270
            :.|.::.:||..|.::.......:...|...:||:|||..|.....||.||....: .|..:...
 Frog   342 AELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQL 406

  Fly   271 SNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL--- 332
            .::.|......:..:..:|.....:.|:| ||.|:.:|.:||..|:.:|.|:|||..::|.|   
 Frog   407 KDADGRPDKVVAEEAWENHIKRNDSIIVD-IFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPMK 470

  Fly   333 ----------------------------------------------------------------- 332
                                                                             
 Frog   471 KERALEVYLVRMDPLAKPMQYKVIVPKIGNIMDLCTALSSLSGIAPEKMVVTDIYNHRFHRIFAM 535

  Fly   333 ----------------------------------------------------------------- 332
                                                                             
 Frog   536 DENLSSIMERDDIYVFETSINRTEDTEQVIIPVYLREKFRHTSYSHHHGSTLFGQPFLITVPRNI 600

  Fly   333 ----------------------------------------------------------------- 332
                                                                             
 Frog   601 TEDKLYNLLLLRMCRYVKATNDTEENDGSLHCNKEHTVNGNGPNGIHEEGSPSEMETDEPDDESS 665

  Fly   333 -------------------GETTTHGGV------------------------------------- 341
                               |:..:..|:                                     
 Frog   666 QDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQSVTGQKKRLFTFQFSNLGSSDITYIKDD 730

  Fly   342 ------------------------------------------------TPK-----TLIDCLERY 353
                                                            ||:     .|.||:|.:
 Frog   731 TKYIRFDERQLRLDERSYLALDWDPKLKKKFFDENAAEDFEKHESVDFTPQKKAFMKLKDCIELF 795

  Fly   354 TRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPV-EFD 417
            |..|.||:.....|..||.:|::||:..|.:||.|:..|||||.:|..:..|:.:.:.||: :.|
 Frog   796 TTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLD 860

  Fly   418 MTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYVRHQKD-TWVKCDDHVITMASLKQVLDS 481
            |:.|:. ..|| |...::|.||.||.|.:..|||||:.:::.| .|...||..::.||.:|::..
 Frog   861 MSTFLI-NPNA-GPCCYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEEQIVSK 923

  Fly   482 EGYLLFYHK 490
            ..|:|||.:
 Frog   924 AAYVLFYQR 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 111/648 (17%)
usp15XP_012814096.1 UBP12 27..932 CDD:227847 116/657 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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