DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32199 and p4ha3

DIOPT Version :9

Sequence 1:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_021322008.1 Gene:p4ha3 / 563281 ZFINID:ZDB-GENE-041010-4 Length:616 Species:Danio rerio


Alignment Length:557 Identity:138/557 - (24%)
Similarity:238/557 - (42%) Gaps:104/557 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLT---TLEEKEEYVSNPLNA 66
            ||::|:.:.:..|..|..:|.||::....:|:.||.:   ..|||..   ...|..:.::||:.|
Zfish    26 TSMLSVNQAVSAERKLIDHLIIYIEHEAQRLEDIKRF---FSRVTSLHDGIYNEPSDPIANPIAA 87

  Fly    67 FPMLRRLNQDWPKWLRYIKLAIASKKIKEMEVQLK----SAPIDDDLKVALKGMTRIEKFHNLHA 127
            |.:::||..:   ||..:....|.:.||.:....:    |.|..:||:.|..|:.|::..:|||.
Zfish    88 FKLVKRLKSE---WLNVVHSTEAEENIKVLREDYRRMESSLPKLEDLRGAAHGLMRLQDVYNLHV 149

  Fly   128 EDLTKGVLM---------GKKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRVHTHPRGMI 183
            |.|.:|...         ...::..|:..||..:|...|:...:..|..|:..|:|         
Zfish   150 ESLVRGHFQQISDPVDFYKLSVSDMLSGDDCFLVGKVAYDLEDYYHSVLWFEEAVR--------- 205

  Fly   184 YAKVLGLKRKRIYKKYAKALLKESLNSDKSKPTPTEK-SEWNRLAKEVTRED--------NYDNV 239
                  |.|...:....:..|:::|:........|.. |....|::|:...|        |.:..
Zfish   206 ------LFRGTEWSPENEGTLEDALDHLAFSHFKTGNISHALSLSRELLLHDPMNRRVHFNVEKY 264

  Fly   240 KKLIDEYLSGDEKIFQEVAARLKRKP-------TKLERGC--RGEWPKK-SSPELICRYNRDTSA 294
            :||::|.|.....     ...|||..       ...|:.|  :|..||. .:|.|.|.|..:.|.
Zfish   265 EKLLNENLPATSS-----GLTLKRPDGIYLRTRNAYEQLCQTKGSQPKHFENPSLFCDYFTNGSP 324

  Fly   295 FLKLAPLKLEFLSVQPMILLYHDVLYENEFKSMRDIAMYNGSMIDGWTYVDFDKKGNPKQQDRVV 359
            .|.|.|::.|.:|:||.::|:|..:.:.|.|::|..||                   |..:..||
Zfish   325 ALFLQPIRREIISLQPYVVLFHGFVTQAEAKNIRKYAM-------------------PGLRRSVV 370

  Fly   360 KMIAFQGTTAPFTLS---------------INRRMADMSGLEMRDNMVLYL--TNYGLGGHFGKH 407
            .. .....||.:.:|               :::|:..::||.::.....||  .|||:|||:..|
Zfish   371 AS-GMNQATAEYRISKSAWLKESAHEVVGKLDQRITLVTGLNVQPPYAEYLQVVNYGIGGHYEPH 434

  Fly   408 VDYVELAKRPPDFFADFGGDRIATALIYASDIPLGGTTVFTKLKIAVQPKKGSALIWFNLNHAGE 472
            .|:......|  .:....|:|:||.:||.|.:..||:|.|.....:|...:.:||.|:||:..|:
Zfish   435 FDHATSDSSP--LYRLKTGNRVATIMIYLSPVQAGGSTAFIYANFSVPVVQNAALFWWNLHKNGQ 497

  Fly   473 PDPLTEHSVCPVVLGSRWIISKWIHERQQVFKKPCLA 509
            .:..|.|:.|||::|::|.:.|    .:...|..|.|
Zfish   498 GNVDTLHAGCPVIVGNKWGMFK----NKNFHKVTCTA 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 38/135 (28%)
P4Hc <369..497 CDD:214780 42/144 (29%)
p4ha3XP_021322008.1 P4Ha_N 27..157 CDD:311993 38/135 (28%)
P4Hc 350..519 CDD:214780 50/190 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583387
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1438683at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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