DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32199 and p4ha1a

DIOPT Version :9

Sequence 1:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_009304776.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:541 Species:Danio rerio


Alignment Length:545 Identity:160/545 - (29%)
Similarity:263/545 - (48%) Gaps:74/545 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YSTSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVSNPLNAF 67
            :.||:..|..||..|:.|.|:|..|::..:|||:.:|.:.:.|..:|.|.:::.|.::.:|:|||
Zfish    25 FFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAEKLDALTATAVQDPEGFLGHPVNAF 89

  Fly    68 PMLRRLNQDWPKWLRYIKLAIASKKIKEMEVQLKSAPIDDDLKVALKGMTRIEKFHNLHAEDLTK 132
            .:::|||.:|.:....:...::...|..:.:|.:..|.|:|...|.|.:.|::..:.|..:.::.
Zfish    90 KLMKRLNTEWGEVEDLVLKDMSDGFISNLTIQRQYFPNDEDQNGAAKALLRLQDTYKLDTQTISS 154

  Fly   133 ----GVLMGKKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRV--HTHPRGMIYAKVLGLK 191
                ||..|....|.||..||..||...|:...:..:..|...||:.  ......:..|..|...
Zfish   155 GDLPGVNTGLPYKSTLTVEDCFELGKIAYSDADYYHTELWMAQALKQLDEGEESSVEIATALDYL 219

  Fly   192 RKRIYK--------KYAKALL------KESLNSDK------SKPTPTEKSEWNRLAKEVTREDNY 236
            ...:|:        :|.|.||      :.:|.:.|      :|....||.:..:  :|..:|...
Zfish   220 SYSVYQQGELERALEYTKRLLTVEPEHQRALGNLKYFDYQLAKQKKAEKEQSTK--EESKKEQET 282

  Fly   237 DNVKKLIDEYLSGDEKIFQEVAARLKRKPTKLERGCRGEWPK---KSSPELICRY-NRDTSAFLK 297
            .:.||   |||..            |||..||   ||||..|   :....|.||| |.:...|..
Zfish   283 SDGKK---EYLPE------------KRKYEKL---CRGEGLKMTPRRQKHLFCRYFNGNRHPFYT 329

  Fly   298 LAPLKLEFLSVQPMILLYHDVLYENEFKSMRDIA---MYNGSMIDGWTYVDFDKKGNP------K 353
            :.|:|.|....:|.|:.||:::.|.|.:.:::::   :...::            .||      .
Zfish   330 IGPVKQEDEWDRPRIIRYHEIITEQEIEKIKELSKPRLRRATI------------SNPITGVLET 382

  Fly   354 QQDRVVKMIAFQGTTAPFTLSINRRMADMSGLEMRDNMVLYLTNYGLGGHFGKHVDYVELAKRPP 418
            ...|:.|.........|....||:|:.|::||.::....|.:.|||:||.:..|.|:..  |..|
Zfish   383 AHYRISKSAWLAAYEHPVVDRINQRIEDITGLNVKTAEELQVANYGVGGQYEPHFDFGR--KDEP 445

  Fly   419 DFFADFG-GDRIATALIYASDIPLGGTTVFTKLKIAVQPKKGSALIWFNLNHAGEPDPLTEHSVC 482
            |.|.:.| |:||||.|.|.||:..||.|||.::..||:|.||:|:.|:||..:||.|..|.|:.|
Zfish   446 DAFKELGTGNRIATWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVFWYNLFPSGEGDYSTRHAAC 510

  Fly   483 PVVLGSRWIISKWIHERQQVFKKPC 507
            ||::|::|:.:||||||.|.|::||
Zfish   511 PVLVGNKWVSNKWIHERGQEFRRPC 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 35/132 (27%)
P4Hc <369..497 CDD:214780 55/128 (43%)
p4ha1aXP_009304776.1 P4Ha_N 28..157 CDD:285528 34/128 (27%)
TPR repeat 172..207 CDD:276809 8/34 (24%)
TPR repeat 212..242 CDD:276809 7/29 (24%)
Fis1 218..262 CDD:304536 7/43 (16%)
P4Hc 352..525 CDD:214780 61/186 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583419
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1438683at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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