DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32199 and PH4alphaNE2

DIOPT Version :10

Sequence 1:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster


Alignment Length:535 Identity:147/535 - (27%)
Similarity:252/535 - (47%) Gaps:68/535 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YSTSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVS------ 61
            ::.||::|..:|.:|:.|.:|::...:.:..|...||.       .....::.::||.|      
  Fly    30 FARSVVNMDDMLNLEDDLVSNVEKLAEALARKAKTIKW-------GVFKMMKRRQEYKSSMEIFA 87

  Fly    62 NPLNAFPMLRRLNQDWPKWLRYIKLAIASKKIKEMEVQLKSAPIDDDLKVALKGMTRIEKFHNLH 126
            ||::.|.::|.:..:|..||.|::..:..:::..::.::...|...|...|.:|:.:::..:.:.
  Fly    88 NPIDTFSLIRHMQSNWLMWLLYLETPVGQEELFFVDSRMPLLPKYFDFIDAAEGIRKMQATYQMF 152

  Fly   127 AEDLTKGVLMGKKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRVHTH------------P 179
            :.|:.||:|.|.:.||.|...||:|:|.:..|.:::..:..|...::..:..            |
  Fly   153 SSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSRWYAAEQWISASIEAYDQKSSQTDMELLRGP 217

  Fly   180 RGMIYAKVLGLKRKRIYKKYAKALLKESLNSDKSKPTPTEKSEWNRLAKEVTREDNYDNVKKLID 244
            :.....::||..:.: .:.:..||....:....|...|....|:..|.|.              |
  Fly   218 KLADLCRILGQVQMK-QRNHEGALQAYQVALKLSPHDPEIYEEYRILEKR--------------D 267

  Fly   245 EYLSGDEKIFQEVAARLKRKPTKLER-----GCRG--EWPKKSSPELICRYNRDTSAFLKLAPLK 302
            ..||..|.|.|:       |....||     .|.|  :.|:..| .|.|.||..||.||:|||:|
  Fly   268 LTLSDIEPIEQD-------KDNSHERLVLPPCCSGRCQVPRNLS-NLYCVYNHVTSPFLQLAPIK 324

  Fly   303 LEFLSVQPMILLYHDVLYENEFKSMRDIAMYNGSMIDGWTYVDFDKKGNPKQQD--RVVKMIAFQ 365
            .|.||:.|.::|.||::.:.|...:|..:..:  |:...| .|.|...:..|.|  |..|.:.:.
  Fly   325 TEILSIDPFVVLLHDMISQKESTLIRTSSKEH--MLPSAT-TDPDASDDETQVDTYRTSKSVWYS 386

  Fly   366 GTTAPFTLSINRRMADMSGLEMRDNMVLYLTNYGLGGHFGKHVDYVELAKRPPDFFADFGG--DR 428
            ......|..|..|:.|.:||:|.......:.||||||.|..|:|.:...|.      .|.|  ||
  Fly   387 SDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEKN------RFNGTSDR 445

  Fly   429 IATALIYASDIPLGGTTVFTKLKIAVQPKKGSALIWFNLNHAGEPDPLTEHSVCPVVLGSRWIIS 493
            |||.|.|.:::..||.|.|.:|.:.|.|:.||||.|:||:..|.....:.|:.|||::||:|::|
  Fly   446 IATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMS 510

  Fly   494 KWIHERQQVFKKPCL 508
            |||::..|.|.:||:
  Fly   511 KWINDMGQEFTRPCV 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32199NP_730347.1 P4Ha_N 6..137 CDD:462433 29/136 (21%)
P4Hc <369..497 CDD:214780 51/129 (40%)
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433 29/136 (21%)
TPR repeat 175..200 CDD:276809 5/24 (21%)
TPR_16 176..254 CDD:433202 10/78 (13%)
NrfG 217..>260 CDD:443378 7/43 (16%)
TPR repeat 219..249 CDD:276809 4/30 (13%)
P4Hc 342..513 CDD:214780 60/179 (34%)

Return to query results.
Submit another query.