DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32199 and p4ha2

DIOPT Version :9

Sequence 1:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:556 Identity:158/556 - (28%)
Similarity:259/556 - (46%) Gaps:96/556 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVSNPLNAFPM 69
            ||:..|..|:..|..|..:|..|:|..:.||:.::.:.:.|.::|.|:..:.|.::::|:||:.:
Zfish    24 TSIGQMTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKLDKLTRTSTSDPEGFLAHPVNAYKL 88

  Fly    70 LRRLNQDWPKWLRYIKLAIASKKIKEMEVQLKSAPIDDDLKVALKGMTRIEKFHNLHAEDLTKGV 134
            ::|||.:|.:....:....:...|..|.|..:..|.::|.|.|.|.:.|::..:.|.||..:||.
Zfish    89 MKRLNTEWSELESLVLQDPSDGFISNMSVHRQYFPDEEDEKGAAKALLRLQDTYKLDAESFSKGK 153

  Fly   135 LMGK------KLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALR--------------VHTHP 179
            |.|:      :.|:.||..||..:|...||...:..|..|.:.:||              |..:.
Zfish   154 LPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVLWMQQSLRQMDSGEEAKTPKADVLDYL 218

  Fly   180 RGMIY-----AKVLGLKRKRI------------YKKYAKALLKESLNSDKSKPTPTEKSEWNRLA 227
            ...:|     .:.:.|.|:.:            .:.:.:.|.||..:|.:::|.|.:        
Zfish   219 SYSVYQMGDLPRAIELTRRLLAIDPSHQRAGGNLRYFERLLSKELQDSGQTQPEPAD-------- 275

  Fly   228 KEVTREDNYDNVKKLIDEYLSGDEKIFQEVAARLKRKPTKLERGCRGEWPK---KSSPELICRY- 288
            :...:.|.|...|    :||...|               ..|..||||..|   |....|.||| 
Zfish   276 ERPIQLDTYQRPK----DYLPERE---------------AYEALCRGEGVKMTTKRQSRLFCRYR 321

  Fly   289 --NRDTSAFLKLAPLKLEFLSVQPMILLYHDVLYENEFKSMRDIA---MYNGSMIDGWTYVDFDK 348
              ||:....||  |:|.|.....|.|:.:.:.|.:.|.:.:::||   :...::.|         
Zfish   322 DGNRNPRLLLK--PMKEEDEWDSPHIVRFLEALSDEEIQKIKEIATPKLARATVRD--------- 375

  Fly   349 KGNPK------QQDRVVKMIAFQGTTAPFTLSINRRMADMSGLEMRDNMVLYLTNYGLGGHFGKH 407
               ||      ...||.|....:|...|....:|:|:.|::||.:....:|.:.|||:||.:..|
Zfish   376 ---PKTGVLTVAHYRVSKSAWLEGEDDPVIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPH 437

  Fly   408 VDYVELAKRPPDFFADFG-GDRIATALIYASDIPLGGTTVFTKLKIAVQPKKGSALIWFNLNHAG 471
            .|:..  |..||.|...| |:|:||.|.|.||:..||.|||.....:|.|:||:|:.|:||..:|
Zfish   438 FDFSR--KDEPDAFKSLGTGNRVATYLNYMSDVEAGGATVFPDFGASVWPRKGTAVFWYNLFRSG 500

  Fly   472 EPDPLTEHSVCPVVLGSRWIISKWIHERQQVFKKPC 507
            |.|..|.|:.|||::||:|:.:||||||.|.|::||
Zfish   501 EGDYRTRHAACPVLVGSKWVSNKWIHERGQEFRRPC 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 35/128 (27%)
P4Hc <369..497 CDD:214780 53/128 (41%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 35/128 (27%)
P4Hc 353..526 CDD:214780 63/186 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.