DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32199 and P4ha2

DIOPT Version :9

Sequence 1:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001101745.1 Gene:P4ha2 / 360526 RGDID:1309673 Length:535 Species:Rattus norvegicus


Alignment Length:530 Identity:153/530 - (28%)
Similarity:252/530 - (47%) Gaps:48/530 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YSTSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVSNPLNAF 67
            :.||:..|..|:..|:.|..:|..|:...::||..||.:...::.:|..:..:.|.|:::|:||:
  Rat    23 FFTSIGHMTDLIYAEKDLVQSLKEYILAEEAKLSKIKSWASKMEALTSKSAADPEGYLAHPVNAY 87

  Fly    68 PMLRRLNQDWPKWLRYIKLAIASKKIKEMEVQLKSAPIDDDLKVALKGMTRIEKFHNLHAEDLTK 132
            .:::|||.|||.....:....|:..:..:.||.:..|.|:|...|.:.:.|::..:.|..:.:::
  Rat    88 KLVKRLNTDWPALGDLVLQDAAAGFVANLSVQRQFFPTDEDESGAARALMRLQDTYKLDPDMISR 152

  Fly   133 GVLMGKKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRVHTHPRGMIYAKVLGLKRKRIYK 197
            |.|.|.|..:.|:..||..:|...||:..:..:..|....|:...........|.|.|.    |.
  Rat   153 GELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQVLKQLDAGEEATVTKSLVLD----YL 213

  Fly   198 KY----------AKALLKESLNSDKSKPTPTEKSEWN-RLAKEVTREDNYDNVKKLIDEYLSGDE 251
            .|          |..|.:..|:.|.|.    |::..| |..:.:..|:...::....|..|:..|
  Rat   214 SYAVFQLGDLHRAVELTRRLLSLDPSH----ERAGGNLRYFERLLEEERGKSLSNQTDAGLASQE 274

  Fly   252 KIFQEVAARLKRKPTKLERGCRGEWPK---KSSPELICRYNRDTSA-FLKLAPLKLEFLSVQPMI 312
            .:::.....|..:.. .|..||||..|   :....|.|||:..... .|.:||.|.|.....|.|
  Rat   275 NLYERPVDYLPERDV-YESLCRGEGIKMTPRRQKRLFCRYHHGNRVPQLLIAPFKEEDEWDSPHI 338

  Fly   313 LLYHDVLYENEFKSMRDIA---MYNGSMIDGWTYVDFDKKGNPK------QQDRVVKMIAFQGTT 368
            :.|:||:.:.|.:.:::||   :...::.|            ||      ...||.|....:...
  Rat   339 VRYYDVMSDEEIERIKEIAKPKLARATVRD------------PKTGVLTVASYRVSKSSWLEEDD 391

  Fly   369 APFTLSINRRMADMSGLEMRDNMVLYLTNYGLGGHFGKHVDYVELAKRPPDFFADFG-GDRIATA 432
            .|....:||||..::||.::...:|.:.|||:||.:..|.|:....:|  |.|...| |:|:||.
  Rat   392 DPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDER--DAFKRLGTGNRVATF 454

  Fly   433 LIYASDIPLGGTTVFTKLKIAVQPKKGSALIWFNLNHAGEPDPLTEHSVCPVVLGSRWIISKWIH 497
            |.|.||:..||.|||..|..|:.||||:|:.|:||..:||.|..|.|:.|||::|.:|:.:||.|
  Rat   455 LNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFH 519

  Fly   498 ERQQVFKKPC 507
            ||.|.|.:||
  Rat   520 ERGQEFLRPC 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 33/128 (26%)
P4Hc <369..497 CDD:214780 54/128 (42%)
P4ha2NP_001101745.1 P4Ha_N 27..104 CDD:400573 22/76 (29%)
P4Hc 346..519 CDD:214780 63/186 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

Return to query results.
Submit another query.