DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32199 and p4ha3

DIOPT Version :9

Sequence 1:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_031752143.1 Gene:p4ha3 / 100495824 XenbaseID:XB-GENE-962355 Length:547 Species:Xenopus tropicalis


Alignment Length:570 Identity:142/570 - (24%)
Similarity:251/570 - (44%) Gaps:123/570 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IYSTSVMSMMKLLEMEESLKTNLDIYVQEMQSKL-DLIKLYQDSLKRVTLTTLEEKEEY------ 59
            :|| |:.|:.:.:.||.:|..:|..|:|:...:| ||.:.|             ||.:.      
 Frog    31 MYS-SMASIQQAVGMEGALLQHLGQYLQQETQRLSDLRRFY-------------EKVQASHQAGG 81

  Fly    60 --VSNPLNAFPMLRRLNQDWPKWLRYIKLAIASKKIKEM----EVQLKSAPIDDDLKVALKGMTR 118
              |.:|:.|:.:|:||..:   |:..:..:.|::.|:.:    |...:..|..:|::.|.|.:.|
 Frog    82 PPVQDPILAYTLLKRLQSE---WMNVVHSSEANENIQALKEGYEKVKQDLPAPEDVEGAAKALMR 143

  Fly   119 IEKFHNLHAEDLTKGVLMGKKLN-----------SHLTAPDCVALGDYYYNQTQFSGSTHWYRMA 172
            ::..::|:...|.:|:......:           |.::|.||..:|...|:...:..|..|...|
 Frog   144 LQDVYSLNVNGLARGMFQRSSSSDTKLLYNPPHLSIMSADDCFHIGKVAYDMEDYYHSIPWLEEA 208

  Fly   173 L--------RVHTHPRGMI----------YAK------VLGLKRK---------RIYKKYAK--A 202
            :        ...|...|.:          |.|      .|.|.|:         |:.:..||  .
 Frog   209 VSRFRGSYGNWRTEDEGSLEEALDYLAFSYYKAGNISHALDLSRECLLYDPDNGRLARNIAKYEQ 273

  Fly   203 LLKESLNSDKSKPTPTEKSEWNRLAKEVTREDNYDNVKKLIDEYLSGDEKIFQEVAARLKRKPTK 267
            :|.||       ||....:|..:|     :..|..::|         ...:::.:...|..:||.
 Frog   274 ILYES-------PTADADAEEMKL-----QRPNVTHLK---------TRDLYEGLCQTLGSQPTS 317

  Fly   268 LERGCRGEWPKKSSPELICRYNRDTSAFLKLAPLKLEFLSVQPMILLYHDVLYENEFKSMRDIAM 332
            .|           .|.:.|.|:.::..:|.|.|:|.|.:|::|.::||||.:.:.|.:.::::| 
 Frog   318 YE-----------DPHMSCMYDTNSHPYLLLQPMKKEIVSLRPQVVLYHDFVSDLEAEKIKELA- 370

  Fly   333 YNGSMIDGWTYVDFDKKGNPKQQD---RVVKMIAFQGTTAPFTLSINRRMADMSGLEMRDNMVLY 394
                  ..|.:......|. ||.:   |:.|....:.|..||..:::.|::.::||........|
 Frog   371 ------SPWLHRSVVASGE-KQAEAEYRISKSAWLKDTIHPFVQNLDTRISAVTGLNAHPPYAEY 428

  Fly   395 L--TNYGLGGHFGKHVDYVELAKRPPDFFADFGGDRIATALIYASDIPLGGTTVFTKLKIAVQPK 457
            |  .|||:|||:..|.|:....|.|  .:....|:|:||.:||.|.:.|||:|.|.....:....
 Frog   429 LQVVNYGIGGHYEPHFDHATSRKSP--LYRTNTGNRLATFMIYLSHVDLGGSTAFVFANFSSPVV 491

  Fly   458 KGSALIWFNLNHAGEPDPLTEHSVCPVVLGSRWIISKWIHERQQVFKKPC 507
            |.:|:.|:||:..|..|..|.|:.|||::||:|:.:|||||..|.|.:||
 Frog   492 KNAAVFWWNLHRNGLGDEDTLHAGCPVIIGSKWVANKWIHEFGQEFHRPC 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 32/141 (23%)
P4Hc <369..497 CDD:214780 46/129 (36%)
p4ha3XP_031752143.1 P4Ha_N 35..>104 CDD:400573 20/84 (24%)
TPR repeat 182..210 CDD:276809 8/27 (30%)
TPR repeat 215..257 CDD:276809 7/41 (17%)
P4Hc 359..531 CDD:214780 55/181 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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