DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32199 and LOC100492280

DIOPT Version :9

Sequence 1:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_031761347.1 Gene:LOC100492280 / 100492280 -ID:- Length:552 Species:Xenopus tropicalis


Alignment Length:546 Identity:172/546 - (31%)
Similarity:262/546 - (47%) Gaps:60/546 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YSTSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVSNPLNAF 67
            :.||:..|..||..|:.|.|:|..|::..:.||..||.:.|.|..:|.|..::.|.::.:|:|||
 Frog    20 FFTSIGHMTDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKDPEGFLGHPVNAF 84

  Fly    68 PMLRRLNQDWPKWLRYIKLAIASKKIKEMEVQLKSAPIDDDLKVALKGMTRIEKFHNLHAEDLTK 132
            .:::|||.:|.|....|...|:...|..:.:|.:..|.|:|...|.|.:.|::..:||..:.::|
 Frog    85 KLMKRLNTEWVKLENLILKDISDGFISNLTIQRQYFPNDEDQTGAAKALLRLQDTYNLDTDTISK 149

  Fly   133 GVLMGKKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRVHTHPRGMIYAKVLGLKRKRIYK 197
            |.|.|.|..:.|||.||..||...|....:..:..|...||............||:.|.... |.
 Frog   150 GNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQALSQLDAGEESSLDKVMVLDYLS-YA 213

  Fly   198 KYAKALLKESLNSDKSKPTPTEKSEWNRLAKEVTREDNYDNVKKLIDEYLSGDEKIFQ------- 255
            .|.:..|.::|...|             |..|:..|....|......||:...|....       
 Frog   214 VYQQGDLDKALTLTK-------------LLLELDPEHQRGNGNLRYFEYIMSKESNKSSSSPSEG 265

  Fly   256 -EVAARLKRKP-------TKLERGCRGEWPKKSS---PELICRY---NRDTSAFLKLAPLKLEFL 306
             |:..| |.:|       .|.|:.||||..|.:|   ..|.|||   |:|  ..|.|:|.|.|..
 Frog   266 AELGTR-KGRPKDHLPERQKYEKLCRGEGVKMTSRRQKRLFCRYFDGNKD--PLLILSPTKQEDE 327

  Fly   307 SVQPMILLYHDVLYENEFKSMRDIA---MYNGSMIDGWTYV------DFDKK----GNPK----- 353
            ..:|.|:.|||::.:.|...::::|   :...::.:..|.|      ...|:    .:|:     
 Frog   328 WDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLETAQYRISKRRATVHDPQTGKLT 392

  Fly   354 -QQDRVVKMIAFQGTTAPFTLSINRRMADMSGLEMRDNMVLYLTNYGLGGHFGKHVDYVELAKRP 417
             .|.||.|.........|....:|||:..::||:|.....|.:.|||:||.:..|.|:..  |..
 Frog   393 TAQYRVSKSAWLSAYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGMGGQYEPHFDFAR--KDE 455

  Fly   418 PDFFADFG-GDRIATALIYASDIPLGGTTVFTKLKIAVQPKKGSALIWFNLNHAGEPDPLTEHSV 481
            ||.|.:.| |:|:||.|.|.||:..||.|||.::..||.||||:|:.|:||..:||.|..|.|:.
 Frog   456 PDAFKELGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLFESGEGDYSTRHAA 520

  Fly   482 CPVVLGSRWIISKWIHERQQVFKKPC 507
            |||::|::|:.:||||||.|.|::||
 Frog   521 CPVLVGNKWVSNKWIHERGQEFRRPC 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 41/128 (32%)
P4Hc <369..497 CDD:214780 55/128 (43%)
LOC100492280XP_031761347.1 P4Ha_N 24..111 CDD:400573 28/86 (33%)
P4Hc 341..536 CDD:214780 65/196 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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