DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18231 and p4htmb

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_001340234.2 Gene:p4htmb / 799930 ZFINID:ZDB-GENE-110131-7 Length:510 Species:Danio rerio


Alignment Length:486 Identity:97/486 - (19%)
Similarity:147/486 - (30%) Gaps:204/486 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 INAFSLVRRTHQDLPKWHNYSQQIVGMEELFALEEIIAKVPDKKDMAYSLGE-------MHRIE- 133
            ||..:|:...|     ::|.|..|....:..:.:....||....|...:...       :.||| 
Zfish    70 INVIALLLYVH-----YNNGSNAISANRDFTSSDSSSHKVTGASDAQATADSGFPRNMFLPRIEG 129

  Fly   134 -QIYDLEAIELARGRI-QGKQYDFRP---------SIRDC---VALGEHKFKREDYQRASMWFRV 184
             ::..::.:.|..|:: :.|....:|         |..:|   |.|.:.|...|.        :|
Zfish   130 IRVGHVQKVSLVSGKVHEMKTLSLKPLLFEIPDFLSEEECAVVVRLAQLKGLMES--------QV 186

  Fly   185 AIKHEPEGNAEIINSILGDPKVNLY--------------TLYAKSMLIFGMIKSNPSMTIAEAKK 235
            .:   |||..|:      |.::||.              .|....:|....::....:|....|:
Zfish   187 MV---PEGQEEL------DQQLNLSPEEIFNFLDLNQDGQLQPHEILTHSRVRDGIWLTSENLKE 242

  Fly   236 ISYEALNKASLADIKSLLN-----ELLSQTDDEIVYEMNVNKTKPSDYEIGCRGQFLRRRNHVCT 295
            | |:.| ||.| |...||:     .|.|......:.:..|.           |.|.:|...|   
Zfish   243 I-YDGL-KADL-DGNGLLSLEEFGRLRSDAFQRFLLQRGVE-----------RSQLVRNSRH--- 290

  Fly   296 YNFTITEFLKLAPLKQEVLNWDPYIVIY-----HDVLNDDEIDKLKNHLNDTDAVEVNPIEKRIF 355
                               .|     :|     |.||.|                        :.
Zfish   291 -------------------TW-----LYQGQGAHQVLQD------------------------LR 307

  Fly   356 QRINELTRLS---FEHSD--QQIVSKNGPRTHKHKK---------------------------EY 388
            :|:..||||.   .|.|:  |.:..:.|...|.|..                           .|
Zfish   308 KRVTLLTRLPSSLVELSEPLQVVRYEQGGHYHAHHDSGPVYPETACTHTRLAANTTSPFQTSCRY 372

  Fly   389 LKGTLLFFLNNVELGGAMVFP---------------------------KLKISVFPQKGSCLFWH 426
            :  |:||:||||:.||...||                           |..:.|.|.||:.:||:
Zfish   373 I--TVLFYLNNVQEGGETTFPVADNRTYEEASLIQNDVDLLDTRKHCDKGNLRVKPVKGTAVFWY 435

  Fly   427 NTL----------DPRSEPLECPVLQGNKRV 447
            |.|          |..|....|.|.||.|.|
Zfish   436 NYLSDGRGWVGEQDEYSLHGGCVVTQGTKWV 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 15/79 (19%)
2OG-FeII_Oxy 322..449 CDD:304390 45/200 (23%)
p4htmbXP_001340234.2 EF-hand_7 204..262 CDD:290234 13/60 (22%)
EFh 204..262 CDD:298682 13/60 (22%)
P4Hc 285..471 CDD:214780 48/235 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583467
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.