DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18231 and P4ha1

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_742059.2 Gene:P4ha1 / 64475 RGDID:621000 Length:534 Species:Rattus norvegicus


Alignment Length:534 Identity:127/534 - (23%)
Similarity:234/534 - (43%) Gaps:120/534 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YSSITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFEDREKYVGNPINAFS 81
            ::||.::..|:..|:..:|::|.|.....:|::.::.:.:.:|.....:.:|.|.:||:|:|||.
  Rat    22 FTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTSTATKDPEGFVGHPVNAFK 86

  Fly    82 LVRRTHQDLPKWHNYSQQIV-GMEELFALEEIIAK--VPDKKDMAYSLGEMHRIEQIYDLEAIEL 143
            |::|.:.:   |......|: .|.:.|.....|.:  .|:.:|...:...:.|::..|:|:...:
  Rat    87 LMKRLNTE---WSELENLILKDMSDGFISNLTIQRQYFPNDEDQVGAAKALFRLQDTYNLDTNTI 148

  Fly   144 ARGRIQGKQYDFRPSIRDCVALGEHKFKREDYQRASMWFRVAIKHEPEGNAEIINSILGDPKVNL 208
            ::|.:.|.::....:..||..||:..:...||....:|...|:....||....::.:    .|..
  Rat   149 SKGNLPGVKHKSFLTAEDCFELGKVAYTEADYYHTELWMEQALMQLEEGEMSTVDKV----SVLD 209

  Fly   209 YTLYA--------KSMLIF-GMIKSNPSMTIAEAKKISYEAL-------NKASLADIKSLLNELL 257
            |..||        |::|:. .:::.:|....|....:.:|.:       ||::..|         
  Rat   210 YLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLVYFEYIMSKEKDANKSASGD--------- 265

  Fly   258 SQTDDEIVYEMNVNKTKP-------------SDYEIGCRGQFL-----RRRNHVCTYN--FTITE 302
             |:|         .||.|             ..||:.|||:.:     |::...|.|:  ....:
  Rat   266 -QSD---------QKTTPKKKGIAVDYLPERQKYEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPK 320

  Fly   303 FLKLAPLKQEVLNWD-PYIVIYHDVLNDDEIDKLKN-----------HLNDTDAVEV-------- 347
            |: |||.|||. .|| |.|:.:||:::|.||:.:|:           |..:|..:..        
  Rat   321 FI-LAPAKQED-EWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKS 383

  Fly   348 -------NPIEKRIFQRINELTRLSFEHSDQQIVSKNG------PR---THKHKKEYLK------ 390
                   :|:..||..||.:||.|....:::..|:..|      |.   ..|.:.:..:      
  Rat   384 AWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGN 448

  Fly   391 --GTLLFFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----DPRSEPLECPVLQGNKRV- 447
              .|.||::::|..|||.|||::..||:|:||:.:||:|..     |..:....||||.|||.| 
  Rat   449 RIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVS 513

  Fly   448 ---ITQKGAYNGRP 458
               :.::|....||
  Rat   514 NKWLHERGQEFRRP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 30/131 (23%)
2OG-FeII_Oxy 322..449 CDD:304390 47/178 (26%)
P4ha1NP_742059.2 P4Ha_N 25..112 CDD:400573 22/89 (25%)
TPR 205..238 7/36 (19%)
P4Hc 345..518 CDD:214780 45/172 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.