DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18231 and Y43F8B.19

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001123044.2 Gene:Y43F8B.19 / 6418801 WormBaseID:WBGene00077688 Length:243 Species:Caenorhabditis elegans


Alignment Length:214 Identity:52/214 - (24%)
Similarity:82/214 - (38%) Gaps:62/214 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 RNHVC---TYNFTITEFLKLAPLKQEVLNWDPYIVIYHDVLNDDEID---KLKNHLNDTDAVEVN 348
            ::.||   ..||.|        :|.||:.|.|.:|||.|:....::.   :|..||...:.:.||
 Worm     8 KHAVCFEYLQNFQI--------VKVEVVAWRPGLVIYRDLFTGKQVRDHLELMEHLKFEEQLVVN 64

  Fly   349 PIEKRIFQRI------------------------NELTRLSFEHSDQQIVSKNGPRTH------- 382
            .....|..:|                        |.|..|:|:.::..:.....|..|       
 Worm    65 DDGNDIVSKIRRANGTQVFHEDHPAARSIWDTAKNLLPNLNFKTAEDILALSYNPGGHYAAHHDY 129

  Fly   383 ------KHKKEYLK------GTLLFFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----D 430
                  |...|:::      |||:......|.|||.|||:|..:|..:.|...||.|.:     :
 Worm   130 LLYPSEKEWDEWMRVNGNRFGTLIMAFGAAESGGATVFPRLGAAVRTKPGDAFFWFNAMGNSEQE 194

  Fly   431 PRSEPLECPVLQGNKRVIT 449
            ..||...||:.:|.|::.|
 Worm   195 DLSEHAGCPIYKGQKQIST 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528
2OG-FeII_Oxy 322..449 CDD:304390 40/177 (23%)
Y43F8B.19NP_001123044.2 P4Hc 43..217 CDD:214780 38/171 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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