DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18231 and p4ha1a

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_009304776.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:541 Species:Danio rerio


Alignment Length:545 Identity:133/545 - (24%)
Similarity:238/545 - (43%) Gaps:109/545 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NSGESEYVENNSVYSSITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFED 68
            :|..|::      ::||..:..||..|:..:|::|.|......|::.::.:.:.:|.....:.:|
Zfish    19 SSAHSDF------FTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAEKLDALTATAVQD 77

  Fly    69 REKYVGNPINAFSLVRRTHQDLPKWHNYSQQIV-GMEELFALEEIIAK--VPDKKDMAYSLGEMH 130
            .|.::|:|:|||.|::|.:.:   |......:: .|.:.|.....|.:  .|:.:|...:...:.
Zfish    78 PEGFLGHPVNAFKLMKRLNTE---WGEVEDLVLKDMSDGFISNLTIQRQYFPNDEDQNGAAKALL 139

  Fly   131 RIEQIYDLEAIELARGRIQGKQ----YDFRPSIRDCVALGEHKFKREDYQRASMWFRVAIKHEPE 191
            |::..|.|:...::.|.:.|..    |....::.||..||:..:...||....:|...|:|...|
Zfish   140 RLQDTYKLDTQTISSGDLPGVNTGLPYKSTLTVEDCFELGKIAYSDADYYHTELWMAQALKQLDE 204

  Fly   192 G---NAEIINSILGDPKVNLYTLYAKSMLIFGMIKSNPSMTIAEAKKISYEALNKASLADIKSLL 253
            |   :.||..::    ....|::|.:..|...:..:...:|:        |..::.:|.::|...
Zfish   205 GEESSVEIATAL----DYLSYSVYQQGELERALEYTKRLLTV--------EPEHQRALGNLKYFD 257

  Fly   254 NELLSQ--------TDDEIVYEMNVNKTKPS------DYEIGCRGQFL----RRRNHV-CTY-NF 298
            .:|..|        |.:|...|...:..|..      .||..|||:.|    ||:.|: |.| |.
Zfish   258 YQLAKQKKAEKEQSTKEESKKEQETSDGKKEYLPEKRKYEKLCRGEGLKMTPRRQKHLFCRYFNG 322

  Fly   299 TITEFLKLAPLKQEVLNWD-PYIVIYHDVLNDDEIDKLK-------------NHLNDTDAVEV-- 347
            ....|..:.|:|||. .|| |.|:.||:::.:.||:|:|             |.:  |..:|.  
Zfish   323 NRHPFYTIGPVKQED-EWDRPRIIRYHEIITEQEIEKIKELSKPRLRRATISNPI--TGVLETAH 384

  Fly   348 -------------NPIEKRIFQRINELTRLSFEHSDQQIVSKNG------PR---THKHKKEYLK 390
                         :|:..||.|||.::|.|:.:.:::..|:..|      |.   ..|.:.:..|
Zfish   385 YRISKSAWLAAYEHPVVDRINQRIEDITGLNVKTAEELQVANYGVGGQYEPHFDFGRKDEPDAFK 449

  Fly   391 --------GTLLFFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----DPRSEPLECPVLQ 442
                    .|.||::::|..|||.|||::..:|.|.||:.:||:|..     |..:....||||.
Zfish   450 ELGTGNRIATWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVFWYNLFPSGEGDYSTRHAACPVLV 514

  Fly   443 GNKRV----ITQKGAYNGRPMQYKK 463
            |||.|    |.::|....||...|:
Zfish   515 GNKWVSNKWIHERGQEFRRPCGLKE 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 29/131 (22%)
2OG-FeII_Oxy 322..449 CDD:304390 48/180 (27%)
p4ha1aXP_009304776.1 P4Ha_N 28..157 CDD:285528 29/131 (22%)
TPR repeat 172..207 CDD:276809 11/34 (32%)
TPR repeat 212..242 CDD:276809 4/33 (12%)
Fis1 218..262 CDD:304536 8/51 (16%)
P4Hc 352..525 CDD:214780 46/174 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583442
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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