DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18231 and p4ha2

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:513 Identity:129/513 - (25%)
Similarity:223/513 - (43%) Gaps:101/513 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VYSSITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFEDREKYVGNPINAF 80
            |::|..::..|:..|...:.::|.|..:..|::..::.:...||....:|..|.|.|:|:|:||:
 Frog    23 VFTSTGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRSTADPEGYLGHPVNAY 87

  Fly    81 SLVRRTHQDLPKWHNYSQQIV-----GMEELFALEEIIAKVPDKKDMAYSLGEMHRIEQIYDLEA 140
            .||:|.:.|   |.:....::     |....|..:.  ...|.::|...:...:.||:..|.|:.
 Frog    88 KLVKRFNTD---WSSLENLVLQDSAKGFIANFTFQR--EYFPTEEDETGAARALMRIQDTYKLDP 147

  Fly   141 IELARGRIQGKQYDFRPSIRDCVALGEHKFKREDYQRASMWFRVAIKHEPEGNAEIINSI----- 200
            ..:|:|::.|..|....|..|...:|:..:...||....:|.:.|:|...||...::|.:     
 Frog   148 DVIAKGKLPGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQALKQMDEGEDAVVNKVDVLDY 212

  Fly   201 -------LGD-PKVNLYTLYAKSMLIFGMIKSNPSMTIAEAKKISYEALNKASLADIKSLLNELL 257
                   ||| |:....|   |.:|   .:..|....:...|  .:|.:.:...|::|.  ||..
 Frog   213 LSYTVFQLGDVPRALELT---KRLL---ALDPNHDRAVNNLK--YFEKMQEKQKAELKQ--NEST 267

  Fly   258 ---SQTDDEIVYEMNVNKTKPSD-YEIGCRGQFL-----RRRNHVCTY-NFTITEFLKLAPLKQE 312
               |.|....||...::.....| ||..|||:.:     |:|...|.| |...:.:|.|:|:|.|
 Frog   268 NTESATRQPGVYSRPLDYLPERDVYEALCRGEGVKMNPRRQRRLFCRYHNGNRSPYLILSPVKVE 332

  Fly   313 VLNWD-PYIVIYHDVLNDDEIDKLK-----------------------NH-------LNDTDAVE 346
            . .|| |.||.|.:.|:|:||.|:|                       |:       |.:.|   
 Frog   333 D-EWDSPRIVRYLNALSDEEIAKIKELAKPKLARATVRDPKTGVLSVANYRVSKSAWLEEND--- 393

  Fly   347 VNPIEKRIFQRINELTRLSFEHSDQQIVSKNG------PR---THKHKKEYLK--------GTLL 394
             :|:..|:..|:..:|.|:.:.::...|:..|      |.   :.|.:.:..|        .|.|
 Frog   394 -DPVIARVNLRMQAITGLTVDTAELLQVANYGMGGQYEPHFDFSRKDEPDVFKRLGTGNRVATFL 457

  Fly   395 FFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----DPRSEPLECPVLQGNKRV 447
            .::::||.|||.|||....:::|:||:.:||:|..     |.|:....||||.|:|.|
 Frog   458 NYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGSKWV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 31/133 (23%)
2OG-FeII_Oxy 322..449 CDD:304390 45/178 (25%)
p4ha2XP_012814344.2 P4Ha_N 27..113 CDD:400573 21/88 (24%)
TPR repeat 166..201 CDD:276809 9/34 (26%)
TPR repeat 206..236 CDD:276809 7/35 (20%)
P4Hc 348..521 CDD:214780 43/172 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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