DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18231 and p4ha2

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:545 Identity:122/545 - (22%)
Similarity:228/545 - (41%) Gaps:133/545 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VYSSITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFEDREKYVGNPINAF 80
            :::||.::..|:..|...:.::|.|.....:|::.::::.:.:|...:.|..|.|.::.:|:||:
Zfish    22 IFTSIGQMTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKLDKLTRTSTSDPEGFLAHPVNAY 86

  Fly    81 SLVRRTHQDLPKWHNYSQQIVGMEELFALEEIIAK----------------VPDKKDMAYSLGEM 129
            .|::|.:.:   |..             ||.::.:                .||::|...:...:
Zfish    87 KLMKRLNTE---WSE-------------LESLVLQDPSDGFISNMSVHRQYFPDEEDEKGAAKAL 135

  Fly   130 HRIEQIYDLEAIELARGRIQGK------QYDFRPSIRDCVALGEHKFKREDYQRASMWFRVAIKH 188
            .|::..|.|:|...::|::.|:      :|:...::.||..:|:..:...||..:.:|.:.:::.
Zfish   136 LRLQDTYKLDAESFSKGKLPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVLWMQQSLRQ 200

  Fly   189 EPEGNAEIINSILGDPKVNLYTLYAKSMLIFG-----------MIKSNPSMTIAEAKKISYEALN 242
            ...|..      ...||.::....:.|:...|           ::..:||...|......:|.|.
Zfish   201 MDSGEE------AKTPKADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQRAGGNLRYFERLL 259

  Fly   243 KASLADIKSLLNELLSQTDDEIVYEMNV---NKTKPSD-------YEIGCRGQFL-----RRRNH 292
            ...|.|        ..||..|...|..:   ...:|.|       ||..|||:.:     |:...
Zfish   260 SKELQD--------SGQTQPEPADERPIQLDTYQRPKDYLPEREAYEALCRGEGVKMTTKRQSRL 316

  Fly   293 VCTY-NFTITEFLKLAPLKQEVLNWD-PYIVIYHDVLNDDEIDKLKN------------------ 337
            .|.| :......|.|.|:|:|. .|| |:||.:.:.|:|:||.|:|.                  
Zfish   317 FCRYRDGNRNPRLLLKPMKEED-EWDSPHIVRFLEALSDEEIQKIKEIATPKLARATVRDPKTGV 380

  Fly   338 ----HLNDTDAV----EVNPIEKRIFQRINELTRLSFEHSDQQIVSKNG------PR---THKHK 385
                |...:.:.    |.:|:..|:.|||.::|.|:.:.::...|:..|      |.   :.|.:
Zfish   381 LTVAHYRVSKSAWLEGEDDPVIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPHFDFSRKDE 445

  Fly   386 KEYLK--------GTLLFFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----DPRSEPLE 437
            .:..|        .|.|.::::||.|||.|||....||:|:||:.:||:|..     |.|:....
Zfish   446 PDAFKSLGTGNRVATYLNYMSDVEAGGATVFPDFGASVWPRKGTAVFWYNLFRSGEGDYRTRHAA 510

  Fly   438 CPVLQGNKRV----ITQKGAYNGRP 458
            ||||.|:|.|    |.::|....||
Zfish   511 CPVLVGSKWVSNKWIHERGQEFRRP 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 27/144 (19%)
2OG-FeII_Oxy 322..449 CDD:304390 47/178 (26%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 27/144 (19%)
P4Hc 353..526 CDD:214780 46/172 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.