DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18231 and p4ha3

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_031752143.1 Gene:p4ha3 / 100495824 XenbaseID:XB-GENE-962355 Length:547 Species:Xenopus tropicalis


Alignment Length:534 Identity:122/534 - (22%)
Similarity:208/534 - (38%) Gaps:141/534 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VYSSITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFEDREKYVGNPINAF 80
            :|||:..:.:.:.||...:.::..|..:..:::.:|:.:.:.|    |.|.:.....|.:||.|:
 Frog    31 MYSSMASIQQAVGMEGALLQHLGQYLQQETQRLSDLRRFYEKV----QASHQAGGPPVQDPILAY 91

  Fly    81 SLVRRTHQDLPKWHNYSQQIVGMEELFALEEIIAKV----PDKKDMAYSLGEMHRIEQIYDLEAI 141
            :|::|...:   |.|........|.:.||:|...||    |..:|:..:...:.|::.:|.|...
 Frog    92 TLLKRLQSE---WMNVVHSSEANENIQALKEGYEKVKQDLPAPEDVEGAAKALMRLQDVYSLNVN 153

  Fly   142 ELARGRIQGKQYD-----FRP------SIRDCVALGEHKFKREDYQRASMWFRVAI--------- 186
            .||||..|.....     :.|      |..||..:|:..:..|||..:..|...|:         
 Frog   154 GLARGMFQRSSSSDTKLLYNPPHLSIMSADDCFHIGKVAYDMEDYYHSIPWLEEAVSRFRGSYGN 218

  Fly   187 -KHEPEGNAEIINSILGDPKVNLYTLYAKSMLIFGMIKSNPSMTIAEAKKISYEAL--------N 242
             :.|.||:.|                .|...|.|...|:.   .|:.|..:|.|.|        .
 Frog   219 WRTEDEGSLE----------------EALDYLAFSYYKAG---NISHALDLSRECLLYDPDNGRL 264

  Fly   243 KASLADIKSLLNELLSQTDDEIVYEM-----NVNKTKPSD-YE-----IGCRGQFLRRRNHVCTY 296
            ..::|..:.:|.|  |.|.|....||     ||...|..| ||     :|.:.......:..|.|
 Frog   265 ARNIAKYEQILYE--SPTADADAEEMKLQRPNVTHLKTRDLYEGLCQTLGSQPTSYEDPHMSCMY 327

  Fly   297 NFTITEFLKLAPLKQEVLNWDPYIVIYHDVLNDDEIDKLKN------H----------------- 338
            :.....:|.|.|:|:|:::..|.:|:|||.::|.|.:|:|.      |                 
 Frog   328 DTNSHPYLLLQPMKKEIVSLRPQVVLYHDFVSDLEAEKIKELASPWLHRSVVASGEKQAEAEYRI 392

  Fly   339 -----LNDTDAVEVNPIEKRIFQRINELTRLS-----------------------FEHSDQQIVS 375
                 |.||    ::|..:.:..||:.:|.|:                       |:|:    .|
 Frog   393 SKSAWLKDT----IHPFVQNLDTRISAVTGLNAHPPYAEYLQVVNYGIGGHYEPHFDHA----TS 449

  Fly   376 KNGP--RTHKHKKEYLKGTLLFFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----DPRS 433
            :..|  ||:...:   ..|.:.:|::|:|||:..|.....|....|.:.:||.|..     |..:
 Frog   450 RKSPLYRTNTGNR---LATFMIYLSHVDLGGSTAFVFANFSSPVVKNAAVFWWNLHRNGLGDEDT 511

  Fly   434 EPLECPVLQGNKRV 447
            ....|||:.|:|.|
 Frog   512 LHAGCPVIIGSKWV 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 31/132 (23%)
2OG-FeII_Oxy 322..449 CDD:304390 41/184 (22%)
p4ha3XP_031752143.1 P4Ha_N 35..>104 CDD:400573 14/75 (19%)
TPR repeat 182..210 CDD:276809 8/27 (30%)
TPR repeat 215..257 CDD:276809 13/60 (22%)
P4Hc 359..531 CDD:214780 38/178 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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