DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18231 and p4ha1b

DIOPT Version :9

Sequence 1:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_999856.1 Gene:p4ha1b / 100003675 ZFINID:ZDB-GENE-030131-4089 Length:536 Species:Danio rerio


Alignment Length:540 Identity:131/540 - (24%)
Similarity:229/540 - (42%) Gaps:122/540 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NNSVYSSITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFEDREKYVGNPI 77
            :|..::|..::..||..|:..:|::|.|..:...:::.::.:.|.:|.....:.:|.|.::|:|:
Zfish    18 HNDFFTSTGQMTDLLYAEKDLVTSLKEYIKQEENRLEQVKEWADKLDSLTITATQDPEGFLGHPV 82

  Fly    78 NAFSLVRRTHQDLPKWHNYSQQIVGMEELFALEEIIAK----------------VPDKKDMAYSL 126
            |||.|::|.:.:   |.:             ||.::.|                .|..:|...:.
Zfish    83 NAFKLMKRLNSE---WSD-------------LENLVLKDTTNGFISNLTVQRQYFPTDEDQTGAA 131

  Fly   127 GEMHRIEQIYDLEAIELARGRIQGKQYDFRPSIRDCVALGEHKFKREDYQRASMWFRVAIKHEPE 191
            ..:.|::..|.|.|..::.|.:.|..:..|.::.||..||:..:...||....:|...|:....|
Zfish   132 KALLRLQDTYQLSANAISSGDLPGVVHKSRMTVEDCYELGKIAYSDADYYHTELWMAQALSQLDE 196

  Fly   192 GNAEIINSILGDPKVNL-----YTLYAKS------MLIFGMIKSNPSMTIAEAKKISYE-ALNKA 244
            |....|:      ||.:     |.:|.:.      .|...|:|.:|:...|......:| .|.|.
Zfish   197 GEESPID------KVTVMDYLSYAIYQQGELDRALELTKRMLKLDPNHHRANGNLKYFEFQLEKQ 255

  Fly   245 SLADIKSLLNELLSQTDDEIVYEMNVNKTKPSD-------YEIGCRGQFL----RRRNHV-CTY- 296
            ..|:     ||...:....::.:.:..:.:..|       ||..|||:.:    ||::.: |.| 
Zfish   256 RKAE-----NEKKEEDQKRVLDKRDAQRKRSKDPLPERKKYERLCRGEGIKLTPRRQSRLFCRYS 315

  Fly   297 NFTITEFLKLAPLKQEVLNWD-PYIVIYHDVLNDDEIDKLKNHLND-----------TDAVEVNP 349
            |......|.|||:|||. .|| |.||.||::::|.||:.:|.....           |..:|..|
Zfish   316 NNNRNPRLLLAPVKQED-EWDRPRIVRYHEIISDSEIETVKEMAKPRLRRATISNPITGVLETAP 379

  Fly   350 IE---------------KRIFQRINELTRLSFEHSDQQIVSKNG------PR---THKHKKEYLK 390
            ..               :||.|||.::|.|..:.:::..|:..|      |.   ..|.:.:..|
Zfish   380 YRISKSAWLSGYEHSTIERINQRIEDVTGLEMDTAEELQVANYGVGGQYEPHFDFGRKDEPDAFK 444

  Fly   391 --------GTLLFFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----DPRSEPLECPVLQ 442
                    .|.||::::|..|||.||..:..:|:|:||:.:||:|..     |..:....||||.
Zfish   445 ELGTGNRIATWLFYMSDVSAGGATVFTDVGAAVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLV 509

  Fly   443 GNKRV----ITQKGAYNGRP 458
            |||.|    |.::|....||
Zfish   510 GNKWVSNKWIHERGQEFRRP 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 29/144 (20%)
2OG-FeII_Oxy 322..449 CDD:304390 46/178 (26%)
p4ha1bNP_999856.1 P4Ha_N 24..153 CDD:285528 29/144 (20%)
TPR repeat 164..199 CDD:276809 10/34 (29%)
TPR_16 168..238 CDD:290168 17/75 (23%)
TPR repeat 204..234 CDD:276809 6/29 (21%)
P4Hc 347..520 CDD:214780 44/172 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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