DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and AT3G28480

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001189994.1 Gene:AT3G28480 / 822478 AraportID:AT3G28480 Length:324 Species:Arabidopsis thaliana


Alignment Length:271 Identity:71/271 - (26%)
Similarity:127/271 - (46%) Gaps:56/271 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 LISSELKQWINDDSTTPPTDHNLGCRGLFPKKSNLVCRYNSSTNAFLKLAPLKMEEISRDPYIVM 327
            ||||...:::...|.|               :...|.:..:|.::| ...|.::.::|..|.:.:
plant    19 LISSAPNRFLTRSSNT---------------RDGSVIKMKTSASSF-GFDPTRVTQLSWTPRVFL 67

  Fly   328 FHEVISDKD----IEEMKGEITEMENGWTSLGDPKEIVSRVYWIRKESSF-----SKRINQRISD 383
            :...:||::    |:..||::.:........|:..|....|..:|:.|||     |..|:..:|:
plant    68 YEGFLSDEECDHFIKLAKGKLEKSMVADNDSGESVESEDSVSVVRQSSSFIANMDSLEIDDIVSN 132

  Fly   384 M-------TGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVNNTL-GDRIGSIIFYAGEV 440
            :       |....|...::|:.::..|..::||:|::.|:     .|..| |.||.:::.|...|
plant   133 VEAKLAAWTFLPEENGESMQILHYENGQKYEPHFDYFHDQ-----ANLELGGHRIATVLMYLSNV 192

  Fly   441 SQGGQTVFPDLK------------------VAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLV 487
            .:||:||||..|                  .||:|:||:||.:||...::|.|..|||..|||:.
plant   193 EKGGETVFPMWKGKATQLKDDSWTECAKQGYAVKPRKGDALLFFNLHPNATTDSNSLHGSCPVVE 257

  Fly   488 GSRWTITKWLH 498
            |.:|:.|:|:|
plant   258 GEKWSATRWIH 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433
P4Hc 333..498 CDD:214780 58/199 (29%)
AT3G28480NP_001189994.1 PLN00052 51..324 CDD:177683 62/223 (28%)
Blue background indicates that the domain is not in the aligned region.

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