DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and AT-P4H-1

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_181836.1 Gene:AT-P4H-1 / 818910 AraportID:AT2G43080 Length:283 Species:Arabidopsis thaliana


Alignment Length:286 Identity:76/286 - (26%)
Similarity:132/286 - (46%) Gaps:47/286 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 LTNETIDDMANSQLQDAKLMDLEQLISSELKQWINDDSTTPPTDHNLGCRGLFPKKSNLVCRYNS 303
            ||..|:..:..|.||.|.:..||             ||.........|.||...:....|.|:.:
plant    12 LTFVTVGMVIGSLLQLAFINRLE-------------DSYGTGFPSLRGLRGQNTRYLRDVSRWAN 63

  Fly   304 STNA-FLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMKG------EITEMENGWTSLGDPKEI- 360
            ..:| .|::..:|.|.:|..|.|::.|:.:|.::.|.:|.      :::.:.:..|..|...:: 
plant    64 DKDAELLRIGNVKPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDVKTGKGVKSDVR 128

  Fly   361 -VSRVYWIRKESSFS--KRINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTD--RLKEV 420
             .|.::....|.|:.  :.|.:||:..:....|....||:..:....::|||:|::.|  .||..
plant   129 TSSGMFLTHVERSYPIIQAIEKRIAVFSQVPAENGELIQVLRYEPQQFYKPHHDYFADTFNLKRG 193

  Fly   421 DVNNTLGDRIGSIIFYAGEVSQGGQTVFP------------DLK-VAVEPKKGNA-LFWFNAFDD 471
                  |.|:.:::.|..:..:||:|.||            .:| ::|:|.||:| |||....|.
plant   194 ------GQRVATMLMYLTDDVEGGETYFPLAGDGDCTCGGKIMKGISVKPTKGDAVLFWSMGLDG 252

  Fly   472 STPDPRSLHSVCPVLVGSRWTITKWL 497
            .: ||||:|..|.||.|.:|:.|||:
plant   253 QS-DPRSIHGGCEVLSGEKWSATKWM 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433
P4Hc 333..498 CDD:214780 52/191 (27%)
AT-P4H-1NP_181836.1 PLN00052 80..281 CDD:177683 56/205 (27%)
Blue background indicates that the domain is not in the aligned region.

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