DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and p4htmb

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_001340234.2 Gene:p4htmb / 799930 ZFINID:ZDB-GENE-110131-7 Length:510 Species:Danio rerio


Alignment Length:464 Identity:99/464 - (21%)
Similarity:166/464 - (35%) Gaps:124/464 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SNPLNAFGLIRRLNQDWPKLQNYTQKPLGLEQLTAMQDIVSAAPESFDMNEKLKAMHRIETTYDL 153
            ||.::|       |:|      :|.......::|...|..:.|...|..|..|..:..|...: :
Zfish    85 SNAISA-------NRD------FTSSDSSSHKVTGASDAQATADSGFPRNMFLPRIEGIRVGH-V 135

  Fly   154 QPKDIAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKLSTDGSLEIMNRLKEI 218
            |...:..|.:...:         .|:|....|||.:|            ||.: ...::.||  .
Zfish   136 QKVSLVSGKVHEMK---------TLSLKPLLFEIPDF------------LSEE-ECAVVVRL--A 176

  Fly   219 ELKGFATA---VAKRSIYLSNQ-GLTNETIDDMANSQLQDAKLMDLEQLISSELKQ--WINDDST 277
            :|||...:   |.:....|..| .|:.|.|.:..:.. ||.:|...|.|..|.::.  |:..::.
Zfish   177 QLKGLMESQVMVPEGQEELDQQLNLSPEEIFNFLDLN-QDGQLQPHEILTHSRVRDGIWLTSENL 240

  Fly   278 TPPTDHNLGCRGLFPKKSNLVCRYNSSTNAFLKLAPLKMEEISR---DPYIVMFHEVISDKDIEE 339
            ....|      ||   |::|      ..|..|.|     ||..|   |    .|...:..:.:|.
Zfish   241 KEIYD------GL---KADL------DGNGLLSL-----EEFGRLRSD----AFQRFLLQRGVER 281

  Fly   340 MKGEITEMENGWTSLGDPKEIVSRVYWIRKESSFSKRINQRISDMTGFKLEEFPAIQLANFGVGG 404
            .: .:....:.|...|.....|  :..:||..:...|:...:.:::       ..:|:..:..||
Zfish   282 SQ-LVRNSRHTWLYQGQGAHQV--LQDLRKRVTLLTRLPSSLVELS-------EPLQVVRYEQGG 336

  Fly   405 YFKPHYD---FYTDRL---KEVDVNNT----LGDRIGSIIFYAGEVSQGGQTVFP---------- 449
            ::..|:|   .|.:..   ..:..|.|    ...|..:::||...|.:||:|.||          
Zfish   337 HYHAHHDSGPVYPETACTHTRLAANTTSPFQTSCRYITVLFYLNNVQEGGETTFPVADNRTYEEA 401

  Fly   450 -------DL----------KVAVEPKKGNALFWFNAFDD-----STPDPRSLHSVCPVLVGSRWT 492
                   ||          .:.|:|.||.|:||:|...|     ...|..|||..|.|..|::|.
Zfish   402 SLIQNDVDLLDTRKHCDKGNLRVKPVKGTAVFWYNYLSDGRGWVGEQDEYSLHGGCVVTQGTKWV 466

  Fly   493 ITKWLHYAP 501
            ...|::..|
Zfish   467 ANNWINVDP 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 15/73 (21%)
ATP-synt_B <198..278 CDD:304375 20/85 (24%)
P4Hc 333..498 CDD:214780 44/206 (21%)
p4htmbXP_001340234.2 EF-hand_7 204..262 CDD:290234 18/78 (23%)
EFh 204..262 CDD:298682 18/78 (23%)
P4Hc 285..471 CDD:214780 42/194 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583450
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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