DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and P4ha1

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_742059.2 Gene:P4ha1 / 64475 RGDID:621000 Length:534 Species:Rattus norvegicus


Alignment Length:524 Identity:154/524 - (29%)
Similarity:257/524 - (49%) Gaps:60/524 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLNAF 95
            :.:|:..:..|:..|::.:.:...|....::|::.:..:.:.|.|.......:.|.||.:|:|||
  Rat    21 FFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDRLTSTATKDPEGFVGHPVNAF 85

  Fly    96 GLIRRLNQDWPKLQNYTQKPLG---LEQLTAMQDIVSAAPESFDMNEKLKAMHRIETTYDLQPKD 157
            .|::|||.:|.:|:|...|.:.   :..||..:...   |...|.....||:.|::.||:|....
  Rat    86 KLMKRLNTEWSELENLILKDMSDGFISNLTIQRQYF---PNDEDQVGAAKALFRLQDTYNLDTNT 147

  Fly   158 IAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKLSTDGSLEIMNRLKEIELKG 222
            |:||.|...:....|...||..|....:...::..:.||.::||....:|.:..::::..::...
  Rat   148 ISKGNLPGVKHKSFLTAEDCFELGKVAYTEADYYHTELWMEQALMQLEEGEMSTVDKVSVLDYLS 212

  Fly   223 FATAVAKRSIYLSNQG-------LTNETIDDMANSQLQDAKLMDLEQLISSEL---KQWINDDS- 276
            :|       :|  .||       ||.:.::.....|..:..|:..|.::|.|.   |....|.| 
  Rat   213 YA-------VY--QQGDLDKALLLTKKLLELDPEHQRANGNLVYFEYIMSKEKDANKSASGDQSD 268

  Fly   277 --TTPP------------TDHNLGCRG----LFPKK-SNLVCRY-NSSTNAFLKLAPLKMEEISR 321
              |||.            ..:.:.|||    :.|:: ..|.||| :.:.|....|||.|.|:...
  Rat   269 QKTTPKKKGIAVDYLPERQKYEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWD 333

  Fly   322 DPYIVMFHEVISDKDIEEMKGEITEMENGWTSLGDPK--EIVSRVYWIRKESSFS-------KRI 377
            .|.|:.||::|||.:||.:| ::.:......::.||:  ::.:..|.:.|.:..|       .||
  Rat   334 KPRIIRFHDIISDAEIEIVK-DLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRI 397

  Fly   378 NQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVNNTL--GDRIGSIIFYAGEV 440
            |.||.|:||..:.....:|:||:||||.::||:||  .|..|.|....|  |:||.:.:||..:|
  Rat   398 NMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDF--ARKDEPDAFRELGTGNRIATWLFYMSDV 460

  Fly   441 SQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFV 505
            |.||.||||::..:|.||||.|:||:|.|.....|..:.|:.||||||::|...||||...|.|.
  Rat   461 SAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFR 525

  Fly   506 KPCS 509
            :||:
  Rat   526 RPCT 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433 35/132 (27%)
P4Hc 333..498 CDD:214780 67/175 (38%)
P4ha1NP_742059.2 P4Ha_N 24..155 CDD:462433 36/133 (27%)
TPR 205..238 6/41 (15%)
P4Hc 345..518 CDD:214780 67/175 (38%)

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