DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and Y43F8B.19

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001123044.2 Gene:Y43F8B.19 / 6418801 WormBaseID:WBGene00077688 Length:243 Species:Caenorhabditis elegans


Alignment Length:221 Identity:61/221 - (27%)
Similarity:95/221 - (42%) Gaps:53/221 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 LKMEEISRDPYIVMFHEVISDKDI-------EEMKGEITEMENGWTSLGDPKEIVSRVYWIRKES 371
            :|:|.::..|.:|::.::.:.|.:       |.:|.|...:.|     .|..:|||::       
 Worm    22 VKVEVVAWRPGLVIYRDLFTGKQVRDHLELMEHLKFEEQLVVN-----DDGNDIVSKI------- 74

  Fly   372 SFSKRIN-------------------QRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDF--YTD 415
               :|.|                   :.:.....||..|  .|...::..||::..|:|:  |..
 Worm    75 ---RRANGTQVFHEDHPAARSIWDTAKNLLPNLNFKTAE--DILALSYNPGGHYAAHHDYLLYPS 134

  Fly   416 RLKEVD----VNNTLGDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDP 476
            . ||.|    ||   |:|.|::|...|....||.||||.|..||..|.|:|.|||||..:|..:.
 Worm   135 E-KEWDEWMRVN---GNRFGTLIMAFGAAESGGATVFPRLGAAVRTKPGDAFFWFNAMGNSEQED 195

  Fly   477 RSLHSVCPVLVGSRWTITKWLHYAPQ 502
            .|.|:.||:..|.:...|.||....|
 Worm   196 LSEHAGCPIYKGQKQISTIWLRMRDQ 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528
ATP-synt_B <198..278 CDD:304375
P4Hc 333..498 CDD:214780 55/196 (28%)
Y43F8B.19NP_001123044.2 P4Hc 43..217 CDD:214780 55/194 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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