DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and p4ha2

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:523 Identity:149/523 - (28%)
Similarity:253/523 - (48%) Gaps:73/523 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLNAFGLIRRLN 102
            :..|:..|::.:.:...|....:|::..:..:...:...:.::..:.|.::.:|:||:.|::|.|
 Frog    30 MTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRSTADPEGYLGHPVNAYKLVKRFN 94

  Fly   103 QDWPKLQNYTQKPLGLEQLTAMQDIVSA-----------APESFDMNEKLKAMHRIETTYDLQPK 156
            .||..|:|           ..:||....           .|...|.....:|:.||:.||.|.|.
 Frog    95 TDWSSLEN-----------LVLQDSAKGFIANFTFQREYFPTEEDETGAARALMRIQDTYKLDPD 148

  Fly   157 DIAKGLLQRTEFNYRLLFRDCLA---LAYHKFEIGEFKRSLLWFQEALKLSTDGSLEIMNRLKEI 218
            .||||.|..|.:...|...|...   :|||.   |::..::||.|:|||...:|...::|::..:
 Frog   149 VIAKGKLPGTNYISSLSADDSFGMGKIAYHD---GDYYHTVLWMQQALKQMDEGEDAVVNKVDVL 210

  Fly   219 ELKG---FATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSELKQWINDDSTTPP 280
            :...   |......|::.|:.:.|..:...|.|.:.|:..:.|..:|  .:||||  |:.:.|..
 Frog   211 DYLSYTVFQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEKMQEKQ--KAELKQ--NESTNTES 271

  Fly   281 TDHNLG------------------CRG----LFPKKS-NLVCRY-NSSTNAFLKLAPLKMEEISR 321
            .....|                  |||    :.|::. .|.||| |.:.:.:|.|:|:|:|:...
 Frog   272 ATRQPGVYSRPLDYLPERDVYEALCRGEGVKMNPRRQRRLFCRYHNGNRSPYLILSPVKVEDEWD 336

  Fly   322 DPYIVMFHEVISDKDIEEMKGEITEMENGWTSLGDPKE--------IVSRVYWIRK-ESSFSKRI 377
            .|.||.:...:||::|.::| |:.:.:....::.|||.        .||:..|:.: :.....|:
 Frog   337 SPRIVRYLNALSDEEIAKIK-ELAKPKLARATVRDPKTGVLSVANYRVSKSAWLEENDDPVIARV 400

  Fly   378 NQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVNNTL--GDRIGSIIFYAGEV 440
            |.|:..:||..::....:|:||:|:||.::||:||  .|..|.||...|  |:|:.:.:.|..:|
 Frog   401 NLRMQAITGLTVDTAELLQVANYGMGGQYEPHFDF--SRKDEPDVFKRLGTGNRVATFLNYMSDV 463

  Fly   441 SQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFV 505
            ..||.|||||...|:.||||.|:||:|.|.....|.|:.|:.|||||||:|...||.|...|.|:
 Frog   464 EAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGSKWVSNKWFHERGQEFL 528

  Fly   506 KPC 508
            :||
 Frog   529 RPC 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433 30/136 (22%)
P4Hc 333..498 CDD:214780 65/175 (37%)
p4ha2XP_012814344.2 P4Ha_N 26..157 CDD:462433 31/137 (23%)
BepA 166..>247 CDD:443813 19/83 (23%)
TPR repeat 166..201 CDD:276809 12/37 (32%)
TPR repeat 206..236 CDD:276809 4/29 (14%)
P4Hc 348..521 CDD:214780 65/175 (37%)

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