DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and PH4alphaPV

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster


Alignment Length:501 Identity:170/501 - (33%)
Similarity:281/501 - (56%) Gaps:35/501 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLNAF 95
            :.:||.|:||||.:|.:.:.|...||..|::|:..:...:.:|:..|.|..:..|:::|||||:|
  Fly    32 HCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSF 96

  Fly    96 GLIRRLNQDWPKLQNYTQKPLGLEQLTAMQDIVSAAPESFDMNEKLKAMHRIETTYDLQPKDIAK 160
            .||||:|:||...|.|...|:|:.|:..:|::....|...|:.|.:.|:.||::||.|:..:|:.
  Fly    97 SLIRRMNRDWIIWQLYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPEISH 161

  Fly   161 GLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKL----STDGSLEI-MNRLKEIEL 220
            |.|...::|..|...|..|:....|:...:..:..|..:::.|    |....||| .|.::.:  
  Fly   162 GFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEISKNEVRMV-- 224

  Fly   221 KGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSELKQWIND------DSTTP 279
              :|..:.|.:.:.....:.|..:.|..:    |.||:..:..|.:.::...|:      .:|..
  Fly   225 --YAETLLKLNQHADALKVVNIALTDNPH----DIKLLLKKSEIETMIRTGTNNAPPVKVQATGV 283

  Fly   280 PTDHNLGCRGLFPKK--SNLVCRYNSSTNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMKG 342
            ||.:.:||||.||..  |.|.|.||.:|:.||.|||||||.:..|||:|::|:|:|.|:|:|::|
  Fly   284 PTAYQIGCRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKELQG 348

  Fly   343 EIT---EMENGWTSLGDPKEIV----SRVYWIRK-ESSFSKRINQRISDMTGFKLEEFPAIQLAN 399
            ..|   :....:.:.....|:|    |:|.|... .:..:.|:|.||||||||.|.....:||.|
  Fly   349 MATPGLKRATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQLMN 413

  Fly   400 FGVGGYFKPHYDFYTDRLKEVDVNNTL--GDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKGNA 462
            :|:||::..||||:    .:.:.|.|.  ||||.:::||..:|.|||.||||:::.||.|::|:.
  Fly   414 YGLGGHYDQHYDFF----NKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFPNIRKAVFPQRGSV 474

  Fly   463 LFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPC 508
            :.|:|..|:...|.::||:.|||:|||:|...||:....|:|.:||
  Fly   475 VMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPC 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 47/128 (37%)
ATP-synt_B <198..278 CDD:304375 15/90 (17%)
P4Hc 333..498 CDD:214780 67/174 (39%)
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 47/128 (37%)
TPR_11 179..250 CDD:290150 13/74 (18%)
TPR repeat 179..213 CDD:276809 5/33 (15%)
TPR repeat 218..248 CDD:276809 4/33 (12%)
P4Hc 339..510 CDD:214780 67/174 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461752
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1211.860

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