DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18233 and PH4alphaNE1

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:543 Identity:145/543 - (26%)
Similarity:249/543 - (45%) Gaps:64/543 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVRAAAVLILVQSIHSTDPNDFLNRKYYSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNI 68
            |:....:.:|.|...::|         |.||:.||..||..||..........|.:|..:..|..
  Fly     5 VLLVGLIFLLAQGSLASD---------YFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLES 60

  Fly    69 FLDALKRPNHKTHNEREKFVSNPLNAFGLIRRLNQDWPKLQNYTQKPLGLEQLTAMQDIVSAAPE 133
            .|.::::.:....::.|.:::||:|.:.|::||:.||..::...|.........|.::...:.|.
  Fly    61 ELSSIEKEHTMAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEMNFNATREYGLSYPS 125

  Fly   134 SFDMNEKLKAMHRIETTYDLQPKDIAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQ 198
            ..|:.....|:.|:::||.|....:|:|:|...::...:.::||..|....||:.::..:.:|.:
  Fly   126 QEDVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLR 190

  Fly   199 EALKLSTDGSLEIMNRLKEIELKGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQL 263
            |        |:|.:.|.........|......::.|:....|.:::..:.:..........:.|.
  Fly   191 E--------SMERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQF 247

  Fly   264 ISSELKQW-INDDSTTPPTD------------HNLG---------CRG-LFP-KKSNLVCRYNSS 304
            ....::.| :.|..|.||.|            ::|.         ||| :.| .:..|.|||:..
  Fly   248 DPKRIRNWHLGDKGTAPPEDIDDVYLPKHSDSYSLSQEFAKYEKVCRGEVHPIVRQELRCRYSRG 312

  Fly   305 TNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEM---------KGEITEMENGWTSLGDPKEI 360
            .:.:..|||||:||.|.|||:..||:::|...|.::         :..:..:..|  .|......
  Fly   313 NHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRSTVNPLPGG--QLKKSAFR 375

  Fly   361 VSRVYWIRKESSFSK-RINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTD----RLKEV 420
            ||:..|:..||..:. .:.:.:.|.||........:|:||:||||:::||:||:.|    ..:| 
  Fly   376 VSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFRDPNHYPAEE- 439

  Fly   421 DVNNTLGDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPV 485
                  |:||.:.|||..||.|||.|.||.|.:||:|:.||.|||:|.......|.|:.|:.|||
  Fly   440 ------GNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPV 498

  Fly   486 LVGSRWTITKWLHYAPQLFVKPC 508
            |.||:|....|:|...|.|.:||
  Fly   499 LKGSKWIGNVWIHEVTQTFARPC 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433 31/129 (24%)
P4Hc 333..498 CDD:214780 60/178 (34%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..157 CDD:462433 32/130 (25%)
P4Hc 341..511 CDD:214780 60/178 (34%)

Return to query results.
Submit another query.