DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18233 and PH4alphaMP

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_524594.2 Gene:PH4alphaMP / 43624 FlyBaseID:FBgn0026190 Length:535 Species:Drosophila melanogaster


Alignment Length:406 Identity:78/406 - (19%)
Similarity:153/406 - (37%) Gaps:70/406 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   535 VRHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELSSELNISERAFEGMPNL 599
            :|..:..|.....|||. ::|.:.....:.|.......:.:...|:.....|.:..: ..|..::
  Fly  1053 LRKAVAKQYAMNHGKRP-IIDLKPAEGCIVNSFFDSDTLNVVLQSASTDGVLQMHGQ-ITGWEHI 1115

  Fly   600 KFLRFYYRYGD----ESDKLYLPQGLNYLSQKLKILEWDH---FPLTCMPSNFCTEYLVELNMRF 657
            ....:|..|.:    |:||....:.:.....|:..:|.|.   .|.|.:|    .::::.:.:..
  Fly  1116 DLEEYYEEYCEQHKLETDKDLRKRLITMNRNKIITIEPDFAQTVPATPVP----PKHVLSMVLTV 1176

  Fly   658 SKLHKLWEGNRPLANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQK 722
            :...:.|        :|.:.|:.:.|..:  |:.|..    |:|..|..|           .:.:
  Fly  1177 AFFQQDW--------MNHLDLSMNGITDD--DVGTLV----LYLPACRQL-----------RVLR 1216

  Fly   723 LYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANINLESLDELDLT----DCLVLKRFPE 783
            |.:|:.||     .|:..|....|...:|.|......|.:....|.||||:    ....|.....
  Fly  1217 LRMNLLTS-----RSVEMLCFGCKSPSDGTSAAATATAPLGGGQLTELDLSHNPLQDAALVPLAR 1276

  Fly   784 ISTNIKVLKLLRTTIKEVPS-SIKSWP-----RLRDLELSYNQNLKGFMHAL------DIITTMY 836
            :.:|:.:|::||....:|.. |....|     ||...::|.|:..:..:..|      .::...|
  Fly  1277 LCSNLPLLRVLRIRSTDVTHFSTTDAPCIDVSRLETFDISENKLTERSVACLLQQLGDGVLREAY 1341

  Fly   837 FNDIEMQ----EIPLWV-----KKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDC 892
            |..:.:.    :..||.     :::..::.|.|..|:  :|..:|..||......||.:|.:||.
  Fly  1342 FRSLPVHCDNFKPKLWQTLTERQRLDGMRVLSLTNCR--LSDDELEGSLFPALGPNCPALTQLDL 1404

  Fly   893 SFHNPKMSLGFINCLK 908
            |::.......|:..|:
  Fly  1405 SYNVALTKRSFVALLR 1420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433
P4Hc 333..498 CDD:214780
PH4alphaMPNP_524594.2 P4Ha_N 24..158 CDD:462433
P4Hc 336..509 CDD:214780
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.