DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and PH4alphaSG2

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster


Alignment Length:518 Identity:146/518 - (28%)
Similarity:255/518 - (49%) Gaps:60/518 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NRKYYSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREK---FV 88
            |.::| |||..:..|.::|:|.:.....|....|:::|....:::.:|| .|:....:.|   ::
  Fly    22 NGEFY-SSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKR-EHEWATSQLKLDDYL 84

  Fly    89 SNPLNAFGLIRRLNQDW------PKLQNYTQKPLGLEQLTAMQDIVS---AAPESFDMNEKLKAM 144
            .:||:||.||:||.:||      |.|.|..:     |:..|..:::|   ..|:..::...:|.:
  Fly    85 GHPLHAFRLIKRLVRDWDSLIFEPILANNAR-----EEFRAFVEVLSRDLGYPDQSELQGAIKGL 144

  Fly   145 HRIETTYDLQPKDIAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKLSTDGSL 209
            .|::..|:|...|:|.|::....:...|.:|:|..:....|::||::|||.|.|.|..|..:...
  Fly   145 ARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQVAFILLRNSPR 209

  Fly   210 E------IMNRLKE-IELKGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSE 267
            |      .::.::| ..:..|.....|::..|.:|.|.::.    .:|..|..|.  ||..:..:
  Fly   210 EEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQP----THSAQQTQKY--LESRVPGK 268

  Fly   268 LKQWINDDSTTPP--TDHNLGCRG-LFPKKSN---LVCRYNSSTNAFLKLAPLKMEEISRDPYIV 326
                 |...|.|.  :::...|:| ..|::.:   |.|..:...:|:..||||::|.:..||.|.
  Fly   269 -----NVQETKPSWFSNYTRLCQGRRLPEERSGDPLRCYLDGKRHAYFTLAPLQVEPVHLDPDIN 328

  Fly   327 MFHEVISDKDI---------EEMKGEITEMENGWTSLGDPKEIVSRVYWIRKESSFSKRINQRIS 382
            ::|.::|.|.|         |||.........|..::.|.:  ||:..|:..:|.....:.:.|.
  Fly   329 VYHGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLR--VSQQTWLDYKSPVMNSVGRIIQ 391

  Fly   383 DMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDV-NNTLGDRIGSIIFYAGEVSQGGQT 446
            .::||.:.....:|:||:||||.::||.|::     ||:: .|..||||.:.:||..:|.|||.|
  Fly   392 FVSGFDMAGAEHMQVANYGVGGQYEPHPDYF-----EVNLPKNFEGDRISTSMFYLSDVEQGGYT 451

  Fly   447 VFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPCS 509
            ||..|.|.:.|.||..:.|.|.......|.|:||:.|||:|||:.....|:|...|.|.:||:
  Fly   452 VFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRPCN 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 36/140 (26%)
ATP-synt_B <198..278 CDD:304375 16/86 (19%)
P4Hc 333..498 CDD:214780 59/174 (34%)
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 36/140 (26%)
P4Hc 335..503 CDD:214780 59/174 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461761
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.910

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