DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and CG11828

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster


Alignment Length:500 Identity:145/500 - (28%)
Similarity:232/500 - (46%) Gaps:73/500 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLNAFGLIRRLN 102
            :..||::|.|.:.....||..||.||:.:..|.:...........:...:|:|||.:|.|:||..
  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65

  Fly   103 QDWPKLQNYTQ---KPLGLEQ-----LTAMQDIVSAAPESFDMNEKLKAMHRIETTYDLQPKDIA 159
            .|.|||....:   ||...::     |:::.|:        ::...:..|.|.:..|.:...::|
  Fly    66 TDVPKLLELAREEFKPGPFQKFIDYDLSSISDV--------ELETAVTGMLRFQGVYGMDESEMA 122

  Fly   160 KGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKLSTDGSLEIMNRLKEIELKGFA 224
            .|.|...::|.|:...||||:|.|...:.:.|.:..||:.|:. ..:..|:.:|||.:       
  Fly   123 NGKLHGKQYNSRMSAADCLAVATHLENVDKGKLACKWFKVAID-QYEEKLDPVNRLLQ------- 179

  Fly   225 TAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSELKQWINDDSTTPPTD------- 282
              ..:..|| ...|||...:.|:..||   |...|.....|.|    .|.|......|       
  Fly   180 --TGRSQIY-EKLGLTLLAMHDLPASQ---AAFRDSIGWASKE----DNTDLAKHLKDKLAHMFV 234

  Fly   283 HNLGCRG--LFPKKSNLVCRYNSSTNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMKGEIT 345
            |...|||  |.|.||.|.|||....:.||::||:|:|:::.:|::.:||:.||..:.:::. .:|
  Fly   235 HVDNCRGKNLLPSKSYLRCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISPAEQKDLL-HLT 298

  Fly   346 EMENGWTSLGDPKEIVSRVYWIRKESS------------FSKRINQRISDMTGFKLEEFPAIQLA 398
            :               ||:...:|:||            ..:||:|||.|:|||.|||...:.::
  Fly   299 D---------------SRLEHRKKDSSSVEAKVDTNASDHVRRIHQRIEDITGFDLEESEPLTVS 348

  Fly   399 NFGVGGYFKPHYDFYTDRLKEVDVNNTLGDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKGNAL 463
            |:|:||....|.|  .::.||.........|..|.:||..:|..||...||||....:|::|:||
  Fly   349 NYGIGGQDFIHLD--CEQPKEFIGYYPKEYRSASAMFYLSDVQMGGYASFPDLGFGFKPRRGSAL 411

  Fly   464 FWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPC 508
            .|.|..:....|.|||.:.||||:|::|...||:..:.|...|.|
  Fly   412 VWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 32/132 (24%)
ATP-synt_B <198..278 CDD:304375 19/79 (24%)
P4Hc 333..498 CDD:214780 56/176 (32%)
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 32/132 (24%)
P4Hc 287..445 CDD:214780 55/175 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461843
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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