DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and CG4174

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_730342.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster


Alignment Length:494 Identity:136/494 - (27%)
Similarity:226/494 - (45%) Gaps:91/494 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLN---AFGLIRR 100
            :.|||:::..:.|...|..:|::       .|..::|...::....:...::|.|   .:.::|.
  Fly    37 LSLLKLKETHVNNLQSYKKVLKK-------HLQKIRRAIRQSEELLKSTKTSPRNLIYGYKVLRH 94

  Fly   101 LNQDWPKLQNYTQKPLGLEQLTAMQDIVSAAPESFDMNEKLKAMHRIETTYDLQPKDIAKGLLQR 165
            |:.|||:.....:|.|||||:...|.:::..|.|.|..|.:.||||::|.|:|....:.:|.:..
  Fly    95 LHNDWPQYFRLLKKDLGLEQIAVSQMLLTQQPTSVDFEESMGAMHRLQTVYNLDSYAMTEGFIDD 159

  Fly   166 TEFNYRLLFRD-CLALAYHKFEIGEFKRSLLWFQEALKLSTDG-SLEIMNRLKEIELKGFATAVA 228
            .:.|.|....| ||.|......:.::.:|..|.:.||....|. |.|::    :|:|..:...: 
  Fly   160 KDKNIRNWSADECLMLGLMYLFLKDYNQSENWLELALYHYDDNVSPEVL----KIKLWNYPNLL- 219

  Fly   229 KRSIYLSNQGL---------TNETIDDMANSQLQDAKLMDLEQLISSELKQWINDDSTTPPTDHN 284
             .|:..:|:||         .||.:....|......:|..|:.|.|:..|      .|.|.....
  Fly   220 -ESLVEANKGLGHYFEAKKYANELLSINPNHTYMLTQLPKLKHLQSNPAK------LTKPKKVFQ 277

  Fly   285 LG---CRGLFPKKSN-LVCRYNSSTNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMKG--- 342
            |.   |...:.:||. |||||...| .|||||||||||:|..|||.:|:..:..||||.:|.   
  Fly   278 LQKEICSKRYRRKSGVLVCRYVDWT-PFLKLAPLKMEELSMKPYISIFYGFLGQKDIEVLKNVSR 341

  Fly   343 -EITEME-----------NGWTSLGDPKEIVSRVYWIRKESSFSKRINQRISDMTGFKLEEFPAI 395
             ::..:|           |..|||.|   :|             :::|:.|..:|||.|:....:
  Fly   342 PKLQRIEHLSGNCSCKIGNLSTSLHD---VV-------------RKVNELILGITGFPLKGNQML 390

  Fly   396 QLANFGVGGYFKPHYDFYTDRLKEVDVNNTLGDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKG 460
            ::.|:|:.|.:.|         :|..::|    :..:.||.: ...:||:.|||...:.|.|:||
  Fly   391 EVINYGIAGNYNP---------EEPKIHN----KANAFIFLS-NAGKGGEIVFPSRHLKVRPRKG 441

  Fly   461 NALFWFNAFDDSTPDPRSL-HSVCPVLVGSRWTITKWLH 498
            :.|.|.|.       .:|| :..||:|.|:.|...|.|:
  Fly   442 SMLVWENL-------KKSLIYHQCPILKGNMWVANKVLN 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433 34/127 (27%)
P4Hc 333..498 CDD:214780 46/180 (26%)
CG4174NP_730342.2 P4Ha_N 33..159 CDD:462433 34/128 (27%)
TPR repeat 169..197 CDD:276809 7/27 (26%)
TPR repeat 202..245 CDD:276809 10/48 (21%)
PLN00052 311..>470 CDD:177683 54/195 (28%)

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