DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18233 and P4HA3

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001275677.1 Gene:P4HA3 / 283208 HGNCID:30135 Length:604 Species:Homo sapiens


Alignment Length:582 Identity:128/582 - (21%)
Similarity:248/582 - (42%) Gaps:105/582 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AVLILVQSIHSTDPNDFLNRKYYSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDAL 73
            |.|:.|.::.:.||.....|....|::..:.:.|..|:..:.....|....:.::.:|..|.|.:
Human     8 AALLAVLALGTGDPERAAARGDTFSALTSVARALAPERRLLGLLRRYLRGEEARLRDLTRFYDKV 72

  Fly    74 KRPNHKTHNEREKFVSNPLNAFGLIRRLNQDWPKLQNYTQKPLGLEQLTAMQD----IVSAAPES 134
            .    ..|.:....|:|||.||.||:||..||   :|........|.:.|::|    :....|..
Human    73 L----SLHEDSTTPVANPLLAFTLIKRLQSDW---RNVVHSLEASENIRALKDGYEKVEQDLPAF 130

  Fly   135 FDMNEKLKAMHRIETTYDLQPKDIAKGLLQRTE-------FNYRLLFR----DCLALAYHKFEIG 188
            .|:....:|:.|::..|.|..|.:|:|:.||..       ::.:.||.    ||..:....:::|
Human   131 EDLEGAARALMRLQDVYMLNVKGLARGVFQRVTGSAITDLYSPKRLFSLTGDDCFQVGKVAYDMG 195

  Fly   189 EFKRSLLWFQEALKL--------STDGSLEIMNRLKEIELKGFATAVAKRSIYLSNQGLTNETID 245
            ::..::.|.:||:.|        .|:....:.:.|..:....|.......::.||.:.|.....:
Human   196 DYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVSCALSLSREFLLYSPDN 260

  Fly   246 D-MANSQLQDAKLMD-------LEQLISSELKQWINDDSTTPPTDHNLGCRGLFPKKSNLVCRYN 302
            . ||.:.|:..:|:.       .|.:|.......:....|.......||.:....:..:|.|.|.
Human   261 KRMARNVLKYERLLAESPNHVVAEAVIQRPNIPHLQTRDTYEGLCQTLGSQPTLYQIPSLYCSYE 325

  Fly   303 SSTNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMKGEITE--MENGWTSLGDPKEI----- 360
            :::||:|.|.|::.|.|..:|||.::|:.:||.:.:::: |:.|  ::....:.|: |::     
Human   326 TNSNAYLLLQPIRKEVIHLEPYIALYHDFVSDSEAQKIR-ELAEPWLQRSVVASGE-KQLQVEYR 388

  Fly   361 VSRVYWIRKESSFSK--RINQRISDMTGFKLE----EFPAIQLANFGVGGYFKPHYDFYTD---- 415
            :|:..|: |::...|  .:|.||:.:||..:.    |:  :|:.|:|:||:::||:|..|.    
Human   389 ISKSAWL-KDTVDPKLVTLNHRIAALTGLDVRPPYAEY--LQVVNYGIGGHYEPHFDHATSPSSP 450

  Fly   416 --RLKEVDVNNTLGDRIGSIIFYAGEVSQGGQT--VFPDLKVAVEPK----------KGN----- 461
              |:|.       |:|:.:.:.|...|..||.|  ::.:|.|.|...          ||.     
Human   451 LYRMKS-------GNRVATFMIYLSSVEAGGATAFIYANLSVPVVRHCFGGTCTGVVKGTVTHFM 508

  Fly   462 --ALFW----------FNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPCSPR 511
              .|.|          :.:.|.::.||.:......:|....|       ::|..|.:...|:
Human   509 LAVLSWWEISGWPTSGYMSMDRNSADPAAPALKTELLAERSW-------WSPVAFQRSQEPK 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 32/132 (24%)
ATP-synt_B <198..278 CDD:304375 15/95 (16%)
P4Hc 333..498 CDD:214780 46/212 (22%)
P4HA3NP_001275677.1 P4Ha_N 58..159 CDD:285528 29/107 (27%)
TPR_12 186..252 CDD:290160 10/65 (15%)
P4Hc 356..>478 CDD:214780 34/133 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149279
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.