DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18233 and phy-3

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_507251.2 Gene:phy-3 / 188624 WormBaseID:WBGene00004026 Length:318 Species:Caenorhabditis elegans


Alignment Length:277 Identity:75/277 - (27%)
Similarity:114/277 - (41%) Gaps:61/277 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 KQWIND-----DSTTPPTDHNLGCRGLFPKKSNLVC---RYNSSTNAFLKLAPLKMEEISRDPYI 325
            |.|..|     |..|..|..         :|::.:|   .||        :.|:.||.||..|.:
 Worm    47 KWWSTDQLELCDDETKDTKW---------QKNDSICITYVYN--------MLPVDMEIISWAPTL 94

  Fly   326 VMFHEVISDKD-------IEEMKGEITEMENGWTSLGDPKEIVSRVYWIRKESSF---------- 373
            |::..::|.:.       ||:...||.:..:..||:    |...|    |...||          
 Worm    95 VIYRNLMSPRQTASFLNFIEQRDLEIQKTSDFGTSI----ETTHR----RANGSFIPPEDSNVTV 151

  Fly   374 --SKRINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVN---NTLGDRIGSI 433
              ..:..:||..:.....|.|.|:   ::..||::..|||:...|.|: |.:   |..|:|||::
 Worm   152 EIKMQAQKRIPGLNLTVAEHFSAL---SYLPGGHYAVHYDYLDYRSKQ-DYDWWMNKTGNRIGTL 212

  Fly   434 IFYAGEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLH 498
            ||......:||.||||.:...|....|:|.|||||..|...:..|.|..||:..|.:...|.|:.
 Worm   213 IFVLKPAEKGGGTVFPSIGSTVRANAGDAFFWFNAQADEEKEMLSNHGGCPIYEGRKVIATIWIR 277

  Fly   499 YAPQ--LFVKPCSPRVH 513
            ...|  |.:.|....:|
 Worm   278 AYNQRILPMAPAGSSIH 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528
ATP-synt_B <198..278 CDD:304375 4/13 (31%)
P4Hc 333..498 CDD:214780 54/186 (29%)
phy-3NP_507251.2 P4Hc 102..277 CDD:214780 54/186 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.720

Return to query results.
Submit another query.