DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and phy-3

DIOPT Version :10

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_507251.2 Gene:phy-3 / 188624 WormBaseID:WBGene00004026 Length:318 Species:Caenorhabditis elegans


Alignment Length:277 Identity:75/277 - (27%)
Similarity:114/277 - (41%) Gaps:61/277 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 KQWIND-----DSTTPPTDHNLGCRGLFPKKSNLVC---RYNSSTNAFLKLAPLKMEEISRDPYI 325
            |.|..|     |..|..|..         :|::.:|   .||        :.|:.||.||..|.:
 Worm    47 KWWSTDQLELCDDETKDTKW---------QKNDSICITYVYN--------MLPVDMEIISWAPTL 94

  Fly   326 VMFHEVISDKD-------IEEMKGEITEMENGWTSLGDPKEIVSRVYWIRKESSF---------- 373
            |::..::|.:.       ||:...||.:..:..||:    |...|    |...||          
 Worm    95 VIYRNLMSPRQTASFLNFIEQRDLEIQKTSDFGTSI----ETTHR----RANGSFIPPEDSNVTV 151

  Fly   374 --SKRINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVN---NTLGDRIGSI 433
              ..:..:||..:.....|.|.|:   ::..||::..|||:...|.|: |.:   |..|:|||::
 Worm   152 EIKMQAQKRIPGLNLTVAEHFSAL---SYLPGGHYAVHYDYLDYRSKQ-DYDWWMNKTGNRIGTL 212

  Fly   434 IFYAGEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLH 498
            ||......:||.||||.:...|....|:|.|||||..|...:..|.|..||:..|.:...|.|:.
 Worm   213 IFVLKPAEKGGGTVFPSIGSTVRANAGDAFFWFNAQADEEKEMLSNHGGCPIYEGRKVIATIWIR 277

  Fly   499 YAPQ--LFVKPCSPRVH 513
            ...|  |.:.|....:|
 Worm   278 AYNQRILPMAPAGSSIH 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433
P4Hc 333..498 CDD:214780 54/186 (29%)
phy-3NP_507251.2 P4Hc 102..277 CDD:214780 54/186 (29%)
Blue background indicates that the domain is not in the aligned region.

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