DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and P4ha1

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001303300.1 Gene:P4ha1 / 18451 MGIID:97463 Length:534 Species:Mus musculus


Alignment Length:554 Identity:164/554 - (29%)
Similarity:267/554 - (48%) Gaps:70/554 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLNVVRAAAVLILVQSIHSTDPNDFLNRKYYSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDN 65
            |:.||...|:| |.||:  ..|..|       :|:..:..|:..|::.:.:...|....::|::.
Mouse     1 MIWVVLMMAIL-LPQSL--AHPGFF-------TSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQ 55

  Fly    66 LNIFLDALKRPNHKTHNEREKFVSNPLNAFGLIRRLNQDWPKLQNYTQKPLG---LEQLTAMQDI 127
            :..:.:.|.|.......:.|.||.:|:|||.|::|||.:|.:|:|...|.:.   :..||..:..
Mouse    56 IKKWAEKLDRLTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLILKDMSDGFISNLTIQRQY 120

  Fly   128 VSAAPESFDMNEKLKAMHRIETTYDLQPKDIAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKR 192
            .   |...|.....||:.|::.||:|....|:||.|...:....|...||..|....:...::..
Mouse   121 F---PNDEDQVGAAKALFRLQDTYNLDTNTISKGNLPGVQHKSFLTAEDCFELGKVAYTEADYYH 182

  Fly   193 SLLWFQEALKLSTDGSLEIMNRLKEIELKGFATAVAKRSIYLSNQG-------LTNETIDDMANS 250
            :.||.::||....:|.|..::::..::...:|       :|  .||       ||.:.::.....
Mouse   183 TELWMEQALTQLEEGELSTVDKVSVLDYLSYA-------VY--QQGDLDKALLLTKKLLELDPEH 238

  Fly   251 QLQDAKLMDLEQLISSEL---KQWIND--DSTTPPTDHNLG-------------CRG----LFPK 293
            |..:..|:..|.::|.|.   |....|  |..|.|....:.             |||    :.|:
Mouse   239 QRANGNLVYFEYIMSKEKDANKSASGDQSDQKTAPKKKGIAVDYLPERQKYEMLCRGEGIKMTPR 303

  Fly   294 K-SNLVCRY-NSSTNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMKGEITEMENGWTSLGD 356
            : ..|.||| :.:.|....|||.|.|:....|.|:.||::|||.:||.:| ::.:......::.|
Mouse   304 RQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVK-DLAKPRLSRATVHD 367

  Fly   357 PK--EIVSRVYWIRKESSFS-------KRINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDF 412
            |:  ::.:..|.:.|.:..|       .|||.||.|:||..:.....:|:||:||||.::||:||
Mouse   368 PETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDF 432

  Fly   413 YTDRLKEVDVNNTL--GDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPD 475
              .|..|.|....|  |:||.:.:||..:||.||.||||::..:|.||||.|:||:|.|.....|
Mouse   433 --ARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGD 495

  Fly   476 PRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPCS 509
            ..:.|:.||||||::|...||||...|.|.:||:
Mouse   496 YSTRHAACPVLVGNKWVSNKWLHERGQEFRRPCT 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 35/131 (27%)
ATP-synt_B <198..278 CDD:304375 18/91 (20%)
P4Hc 333..498 CDD:214780 67/175 (38%)
P4ha1NP_001303300.1 P4Ha_N 24..153 CDD:285528 35/131 (27%)
TPR 205..238 6/41 (15%)
P4Hc 345..518 CDD:214780 67/175 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.870

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