DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and LOC110438585

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_021326960.1 Gene:LOC110438585 / 110438585 -ID:- Length:441 Species:Danio rerio


Alignment Length:466 Identity:125/466 - (26%)
Similarity:215/466 - (46%) Gaps:93/466 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EKFVSNPLNAFGLIRRLNQDWPKLQNYTQKPLGLEQLTAMQDIVSAA--PESFDMNEKLKAMHRI 147
            |:.:.:|:.|:.|:.||.::...:....|..:.:.|....||.:...  |:..|::.....:.|:
Zfish    23 EENLRDPVAAYKLLCRLREELIYIIETIQSIIDVSQCDEFQDELKTTLIPQYEDLDGAASGLIRL 87

  Fly   148 ETTYDLQPKDIAKGLLQRTEFNYRLLFRDCLALAYHKFEIG-------EFKRSLLWFQEALKLST 205
            :..|.|.|:||.|    .|..:           |...|.:|       :|:.:.|||..:....|
Zfish    88 QEIYKLYPEDITK
----ETSLD-----------ADEAFHVGRVAYKEYKFQHAFLWFSYSGIRWT 137

  Fly   206 DGSLEIMNRLKEIELKGFATAVAKR------SIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLI 264
            :.|     ...|.:|..:.:..||.      :||.|.:.|.....|:....||.  :|:..::..
Zfish   138 ENS-----STNEKDLLHYLSLSAKHFGSLPWAIYYSQELLYLNPYDNEVKLQLN--RLLHFQKSP 195

  Fly   265 SSELKQWINDDSTTPPTDHNLGCRGLFPKKSN-----LVCRYNSS-TNAFLKLAPLKMEEISRDP 323
            :..:   ...||.:  :::...|||...::::     |.|||::| .|..|..||:|.||:..:|
Zfish   196 NPNI---FRLDSLS--SNYEALCRGEVDERTSKRQRALSCRYSTSGGNPRLMYAPVKEEELWDEP 255

  Fly   324 YIVMFHEVISDKDIEEMK-----------------GEITEMENGWTSLGDPKEIVSRVYWIRKES 371
            .|:.||:||||.:||.:|                 |:|:            |..||:..::..:.
Zfish   256 KIIRFHDVISDTEIETLKDIARPQLSRSGVYQDGQGKIS------------KHRVSQSVFLDDDD 308

  Fly   372 SFSKRINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVNNTLG---DRIGSI 433
            .....::|||.|:||..:|:...:.:.|:|:||.|:||.|             .||   |||.:.
Zfish   309 PVDAHVSQRIEDVTGLSMEKAEPLLVQNYGIGGRFEPHID-------------ALGEENDRIATF 360

  Fly   434 IFYAGEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLH 498
            :.|..:|.:||.|||..:.:||:|:||:|:||:|...:...|..:.|:.||||.|::|...||:.
Zfish   361 LIYMSDVEEGGATVFIKVGIAVKPEKGSAVFWYNLQKNGESDFNTKHAGCPVLQGNKWVANKWIA 425

  Fly   499 YAPQLFVKPCS 509
            ...|:|.:|||
Zfish   426 EFGQVFRRPCS 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 19/79 (24%)
ATP-synt_B <198..278 CDD:304375 16/85 (19%)
P4Hc 333..498 CDD:214780 56/184 (30%)
LOC110438585XP_021326960.1 P4Ha_N <19..100 CDD:311993 18/76 (24%)
P4Hc 265..424 CDD:214780 55/183 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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