DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18233 and p4ha1

DIOPT Version :9

Sequence 1:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:527 Identity:142/527 - (26%)
Similarity:246/527 - (46%) Gaps:73/527 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLNAF 95
            :.:|:..::.||..|::.:.:...|....::|:..:..:.|.|.........:.|.::.:|:|||
 Frog    20 FFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKDPEGYLGHPVNAF 84

  Fly    96 GLIRRLNQDWPKLQNYTQKPLG---LEQLTAMQDIVSAAPESFDMNEKLKAMHRIETTYDLQPKD 157
            .|::|||.:|.||:|...|.:.   :..||..:...   |...|.....||:.|::.||:|....
 Frog    85 KLMKRLNTEWVKLENLILKDISDGFISNLTIQRQYF---PNDEDQTGAAKALLRLQDTYNLDTDT 146

  Fly   158 IAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKLSTDGSLEIMNRLKEIELKG 222
            |:||.|...:....|...||..|....:...::..:.||.::||.....|....::::..::...
 Frog   147 ISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQALSQLDAGEESSLDKVMVLDYLS 211

  Fly   223 FAT----------AVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSELKQWINDDST 277
            :|.          .:.|||:.|..:       ....|.        :|..::|.|    .|..|:
 Frog   212 YAVYQQGDLDKALTLTKRSLELDPE-------HQRGNG--------NLRHIMSKE----SNKSSS 257

  Fly   278 TP------------PTDH------NLGCRG-----LFPKKSNLVCRY-NSSTNAFLKLAPLKMEE 318
            :|            |.||      ...|||     ...::..|.||| :...:..|.|:|.|.|:
 Frog   258 SPSEGAELRTRKGRPKDHLEKEKYEKLCRGEGVKMTSRRQKRLFCRYFDGKKDPLLILSPTKQED 322

  Fly   319 ISRDPYIVMFHEVISDKDIEEMKGEITEMENGWTSLGDP--------KEIVSRVYWIR-KESSFS 374
            ....|.||.:|::|||::|.::| |:.:......::.:|        :..:::..|:. .|....
 Frog   323 EWDKPRIVRYHDIISDEEISKVK-ELAKPRLRRATISNPITGVLETAQYRITKSAWLSGYEDPVV 386

  Fly   375 KRINQRISDMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDVNNTL--GDRIGSIIFYA 437
            .|:|:||..:||..:.....:|:||:|:||.::||:||.  |..|.|....|  |:|:.:.:||.
 Frog   387 ARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDFL--RKYEPDAFKKLGTGNRVATWLFYM 449

  Fly   438 GEVSQGGQTVFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQ 502
            .:|..||.||||::..||.||||.|:||:|..:....|..:.|:.||||||::|...||:|...|
 Frog   450 SDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLVGNKWVSNKWIHERGQ 514

  Fly   503 LFVKPCS 509
            .|.:||:
 Frog   515 EFRRPCN 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 35/131 (27%)
ATP-synt_B <198..278 CDD:304375 14/89 (16%)
P4Hc 333..498 CDD:214780 60/175 (34%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 21/86 (24%)
P4Hc 337..510 CDD:214780 60/175 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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