DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and AT5G66060

DIOPT Version :10

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_201407.4 Gene:AT5G66060 / 836738 AraportID:AT5G66060 Length:289 Species:Arabidopsis thaliana


Alignment Length:211 Identity:52/211 - (24%)
Similarity:92/211 - (43%) Gaps:35/211 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 VETLSLKPHIVLYHDVIYDSEISKVKNISLPSL-KSPL---RILYAIDYNLK------FAKIRED 363
            ||.:|.:|...:||:.:...|...:..::.|.: ||.:   :...:.|..::      .|:.|:.
plant    78 VEIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLARGRDK 142

  Fly   364 HQSPLSLRIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNIELQDQTAELGDRLTSIMFFMNDVA 428
            ....:..||.|.|...|:.....|:.:|.|......|.|....:..|...|.|:.:::.:::||.
plant   143 TIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVLMYLSDVE 207

  Fly   429 QGGALAFP----NLNLTIW---------------PQKGSALVWRNL--DHRMQPNQDLLHVSCPV 472
            :||...||    |.:...|               |:.|.||::.::  |..:.|:.  ||..|.|
plant   208 EGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSS--LHGGCAV 270

  Fly   473 VVGSKWTLVKWL--HE 486
            :.|:||:..|||  ||
plant   271 IKGNKWSSTKWLRVHE 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433
P4Hc <371..485 CDD:214780 37/136 (27%)
AT5G66060NP_201407.4 PLN00052 74..288 CDD:177683 52/211 (25%)
Blue background indicates that the domain is not in the aligned region.

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