DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and AT4G35820

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_195307.1 Gene:AT4G35820 / 829736 AraportID:AT4G35820 Length:272 Species:Arabidopsis thaliana


Alignment Length:180 Identity:36/180 - (20%)
Similarity:73/180 - (40%) Gaps:41/180 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 VETLSLKPHIVLYHDVI--------YDSEISKVKNISLPSL-KSPLR-ILYAIDYNLKFAK---- 359
            :|.::.:|...:||:.:        .:.|...:.:::.||: :|.:| .|..:........    
plant    88 LEVITKEPRAFVYHNFLALFFKICKTNEECDHLISLAKPSMARSKVRNALTGLGEESSSRTSSGT 152

  Fly   360 -IREDHQ---SPLSLRIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNIELQDQTAELGDRLTSI 420
             ||..|.   ..:..||.:.|....:.....|:.||.:......|.|..:          |:.::
plant   153 FIRSGHDKIVKEIEKRISEFTFIPQENGETLQVINYEVGQKFEPHFDGFQ----------RIATV 207

  Fly   421 MFFMNDVAQGGALAFPNL-------NLTIWPQKGSALV-WRNLDHRMQPN 462
            :.:::||.:||...||..       .:::.|:||.||: |     .|:|:
plant   208 LMYLSDVDKGGETVFPEAKGIKSKKGVSVRPKKGDALLFW-----SMRPD 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528
P4Hc <371..485 CDD:214780 23/100 (23%)
AT4G35820NP_195307.1 UBN2_2 3..77 CDD:290927
P4Hc 115..262 CDD:214780 32/153 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.920

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