DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and AT4G35810

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001320148.1 Gene:AT4G35810 / 829735 AraportID:AT4G35810 Length:290 Species:Arabidopsis thaliana


Alignment Length:244 Identity:55/244 - (22%)
Similarity:105/244 - (43%) Gaps:46/244 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 DVTGCLRVGQTSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPS 340
            |:|..::..|..:......:.|...:|       |.:|.:|...:||:.:.:.|...:.:::.||
plant    54 DLTTIVQTIQERESFGDEEDGNGDRWL-------EVISWEPRAFVYHNFLTNEECEHLISLAKPS 111

  Fly   341 -LKS---PLRILYAIDYNLKFAK---IREDHQ---SPLSLRIKDMTGEDVQEDTDFQIDNYGICG 395
             :||   .::...:||..::.:.   :...|.   ..:..||.|.|....:.....|:.:|.:..
plant   112 MMKSKVVDVKTGKSIDSRVRTSSGTFLNRGHDEIVEEIENRISDFTFIPPENGEGLQVLHYEVGQ 176

  Fly   396 FRNFHTDNIELQDQTAELGDRLTSIMFFMNDVAQGGALAFP----NLN---------------LT 441
            ....|.|....:....:.|.|:.:::.:::||.:||...||    |::               |:
plant   177 RYEPHHDYFFDEFNVRKGGQRIATVLMYLSDVDEGGETVFPAAKGNVSDVPWWDELSQCGKEGLS 241

  Fly   442 IWPQKGSALV-WRNLDHRMQPNQDL----LHVSCPVVVGSKWTLVKWLH 485
            :.|:|..||: |     .|:|:..|    ||..|||:.|:||:..||.|
plant   242 VLPKKRDALLFW-----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWFH 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528
P4Hc <371..485 CDD:214780 36/137 (26%)
AT4G35810NP_001320148.1 PLN00052 75..289 CDD:177683 52/223 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.920

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